| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5979 |
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| Symbol | |
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| ID | 6279629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2205571 |
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| End bp | 2206428 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642617040 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001889683 |
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| Protein GI | 187920651 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.185285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.666429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAC TTTCCACGCC GCCGCATGGC GTCCACGGCG CGCCGTCACG CCGCTGGCCG
CAAACCGGCT ATCCCGCGAT GCTCACCGCC ACCGCTGCAT GGCATGTCAT CGTGCTGGCA
GGATGGCTGA TCGCGCCCGC CGCATGGCCC TGGTGGGTTG CCGCGATTTT TGTGAATCAC
GCCATTTTCA CCGTGGCCGG CCTGTTGCCG CGCACTTCGC TGCTCGGTCC GAACTGGACC
CGCCTGCCGG CCCACGCGCG CAATGCCGAC GCGATCGCGC TGACCATCGA CGACGGTCCC
GATCCGGCCG TCACGCCGCA AGTGCTGGAC CTGCTCGACA CCTTCGGCGT GCGCGCCACG
TTCTTCTGCA TCGGCGCGAT GGCGCAGCGT TATCCGGAAC TCGCTCGCGA CATCGTCGCG
CGCGGGCATG CGCTCGAAAA CCATTCGCAG GTTCACGTCC ACACGTTTTC CGTGACGTTG
CCGGGCGCCC TCACGCGCGA AATCGACGCG GCGCAATGCA CGCTCGAAGC CCTGAGCGGC
GAACGGCCAA TGTTCTTCCG CGCGCCGGCC GGGCTGCGCA ATATCTTTCT CGAACCAGTC
TTGCGCAAGC TCGATCTGCG GCTCGCGGCA TGGACTAGGC GCGGTTACGA CACGCGTGAG
CGCGATCCTC AGGTGGTCGC GCGGCGACTG CTGGACGGCC TCGCGCCACG CGACATTCTG
CTGCTGCACG ACGGCAACGC CGCCCTTACG GCCGAAGGCA CGCCCTTGAT CCTCGCGGTG
CTGCCGCGCG TGATCGACGC GGCGCGGCAA CGGCATCTGC GTTTCGTGAC GCTGCGCGAA
GCGCGCGTGG ACAACTGA
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| Protein sequence | MKQLSTPPHG VHGAPSRRWP QTGYPAMLTA TAAWHVIVLA GWLIAPAAWP WWVAAIFVNH
AIFTVAGLLP RTSLLGPNWT RLPAHARNAD AIALTIDDGP DPAVTPQVLD LLDTFGVRAT
FFCIGAMAQR YPELARDIVA RGHALENHSQ VHVHTFSVTL PGALTREIDA AQCTLEALSG
ERPMFFRAPA GLRNIFLEPV LRKLDLRLAA WTRRGYDTRE RDPQVVARRL LDGLAPRDIL
LLHDGNAALT AEGTPLILAV LPRVIDAARQ RHLRFVTLRE ARVDN
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