Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5959 |
Symbol | |
ID | 6279431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2182363 |
End bp | 2183514 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642617021 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_001889664 |
Protein GI | 187920632 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.42426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAC GAAAACCGAT GACAAAACGG ATGGTGATCA TGCTGATCTG CGTGGGCCTG CTGCTGGCCG CGCTCGTCGG CTTCAACGTG TTCCGCGCGC ACATGATCGC GAAATTCATG TCGGGTAACG CAGCGCCGCC CGCCACGGTC TCGGCGGTCG TCGCCCGTTA TCAGCAATGG CAACCGCAGC TTGCGGCGGT CGGCAGCCTG CGCGCCGTGC GCGGCGTGGA TGTCACCACC GAAGTCGCGG GCCTCGTACG CGAAGTCGCC TTCAGCTCGG GACAGGAAGC GAGAGCCGGG CAGGTTCTCA TCCGACTCAA CGCCGATAGC GACGTGGCGC TGCTCCGGTC GCTAGAGGCA TCCGCCGAGC TCGCGCAGAC CGTCTACACG CGCGACAAAG CGCAGTACGA CATCAAGGCG ATCGCCAAGG CGCAGCTCGA CGCCGACGCC GCCGACCTGA AGGTCAAGAA GGCGCAAGTC GCGCAACAGG CCGCGCTCGT CGACAAGAAG ACGATTCGCG CGCCGTTCGC CGGGCGCCTG GGCATTACCA CGATCAATCC CGGGCAATAC ATCAATCCGG GCGACGCGAT CGTCACGCTC CAGGCCATCG ATCCGATCTA CGCCGATTTC TACCTGCCGC AGCAGCAACT CGGCCAGCTC GCGATCGGCC AGACCATCGT GGTCGATACC AACGCATACA GCGGCCAAAC GTTCGTGGGC AAGATCCAGT CGGTCAGCCC GAAGGTCGAC AGCACCACGC GCAACGTGCA GATCGAAGCG AGCGTGGACA ACCGGGAGCG CAAGCTGCTG CCGGGCATGT ACGCGAACGT GAAGATCGAC GCGGGCGCGG GCCAGCGCTA CCTGACGCTG CCGCAAACCG CCATCACGTA CAACCCCTAT GGCGCGACCG TATTCATCGT CAAGCCGGGC ACGCAACCCA ATGCGCAGGG TAAGGCGCTG CCCGTCGCGC AGCAGGTGTT CGTCACACCC GGCCCGACGC GCGGCGATCA GGTCGCGATC CTCAAAGGGG TCGACGACGG CGCGCAAGTC GTGACGAGCG GGCAACTCAA GCTGAAAAAC GGCACGCCGC TCGTCATCAA TAACAGCGTG CAGCCGGCGG ACGATCCGAA CCCGACGCCT CAGGAACAAT AG
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Protein sequence | MTERKPMTKR MVIMLICVGL LLAALVGFNV FRAHMIAKFM SGNAAPPATV SAVVARYQQW QPQLAAVGSL RAVRGVDVTT EVAGLVREVA FSSGQEARAG QVLIRLNADS DVALLRSLEA SAELAQTVYT RDKAQYDIKA IAKAQLDADA ADLKVKKAQV AQQAALVDKK TIRAPFAGRL GITTINPGQY INPGDAIVTL QAIDPIYADF YLPQQQLGQL AIGQTIVVDT NAYSGQTFVG KIQSVSPKVD STTRNVQIEA SVDNRERKLL PGMYANVKID AGAGQRYLTL PQTAITYNPY GATVFIVKPG TQPNAQGKAL PVAQQVFVTP GPTRGDQVAI LKGVDDGAQV VTSGQLKLKN GTPLVINNSV QPADDPNPTP QEQ
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