| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5922 |
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| Symbol | |
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| ID | 6277362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2143695 |
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| End bp | 2145695 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642616985 |
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| Product | GAF modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_001889628 |
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| Protein GI | 187920596 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTACG TCTCGCAGAC CCAGCACATC GACCGCGTGC GTGGCGCCAT CGAAGGACGC
CTGCCCGCGC CCGCCGATTC TCCGCGGCTC GTCTCGTCGT GGCAGCGTTC GTTCGAACAG
TACCGGCTCG ACCCCGGCGC CGTGATCGGA CCGCGCGTGC TGAGCTCGGC CGAATTGCGC
GAAGTGCAGG GCAAGGAAGA AGCCTTTCTG CGTGCGTCCG GGCAATGTCT GTCACGTCTG
CACGACATGA TTCGCGTTGC CGACTATTGC GTGATGCTCA CCGACGCGCA CGGCGTCACC
ATCGACTACC GCATCGACCG CGATCGCCGC AGCGATTTCA AGCATGCGGG CCTGTATATC
GGTTCGTGCT GGTCCGAGCG CGAGGAAGGC ACCTGCGGCG TGGCGAACGT GCTGACCGAT
CTTGCGCCGA TCATCGTGCA CAAGACCGAT CATTTCCGCG CGGCGTTCAC CACGCTCACC
TGCAGCGCGG CGCCGATCTT CGCGCCGACG GGAGAGATGA TCGGCGTACT CGATGCATCC
GCCGTGCAGT CGCCGGATAA CCGCGACAGT CAGCGGCTCG TGTTTCAACT GGTGCGGCAA
AGCGCCGGTC TGATCGAAGA CGGGTACTTC CTCAATCAAA CTAGCCAGCA TTGGGTTCTG
TTCGGTCATT CGAGCCGCAA CTTTGTCGAG GCGCAGCCCG AAGTGCTGAT CGCCTTCGAC
GAATGCGGCA ATCTCGTCGC GGCCAATCGC AAGGCGCGCG AGTGCATTCC GGCGCTCAAC
GGTCCGCGCC ACATCGACGA TGTATTCGAC ACATCGGGCT CGCATCTGCA CGACATCGCG
CGCACGGATG CGATTGTCGG CTTGCGCCTG CGCGCAACCG GCACGACGCT GTATGCGCGG
ATTCGTGCGC CGCTCAGGCG CATCTCGCGC GCGGCGTCCA CGCTGAACGA AGGCGCCGCA
CGGTCGTCGC AAAGCGCGTC GCAAAACGAT CTGCACCTCG GCGCACTCGG CCGTTTTCTG
CACAGCGCGG AGCCGCGGAT CGCGCACAAC GCGGCCGTCG CGTTGCGCGT GATGGGCAAG
CGTCTGCCGA TTCTGATTCT CGGCGAGACC GGCGTCGGCA AGGAGGTGTT CGCGCACGCG
GTGCACGATT CGGGCGCGCG GCGCGCGAGG CCGTTTATCG CGGTGAATTG CGGCGCGATT
CCCGAATCGC TGATCGAAAG CGAATTGTTC GGCTACGCGC CCGGCGCCTT CACCGGTGCA
CGCAGCCGCG GCGCGCGCGG CAAGATTGCG CAGGCGCATA CAGGTACGCT GTTTCTCGAT
GAGATCGGCG ACATGCCGCT CGATCTGCAA ACGCGGCTGC TGCGCGTGCT GGCCGAAGGC
GAAGTCACGC CGCTCGGCGC CGATGCACCC GTGCGCGTGG ATATCGACGT GATTTGCGCC
ACACACCGCG ATCTCACGCA GATGGTCGCG GCCGGCACGT TCCGCGAAGA CCTCTATTAC
CGGCTAAGCG GCGCGTCCTT GCCAATACCG CCGCTGCGCG AGCGCGCGGA TATCCGCGAC
GTGATCGAAG CGGTCTTCGA CGAAGAAGCG CAAATGGCCG GCCACGTGCT CACGCTGGAC
CCGCAACTCG CCGAACGTCT CGCAGGATTC GCATGGCCGG GCAACATTCG CCAGTTGCGC
AACGTGCTGC GTTACGCGTG TGCGATCTGC GACAGCGCGC GCGTGGAATT GCGCCATGTC
GCGCCGGATA TGGCGGCGTT GCTCGCACCC GAGGCCGTGC ATAAACCAGC GTTATTGCGG
ATCGATCCGC ATGACGGCCG GCAGCGGGAT GCGCTGCAGG CCCCGCGGCA GGACCCGCGC
GAAGAGCGTG CACGCATTAT CGACGCGCTC ACACGCCACC AATGGCGACC CAACGCAGCG
GCGCAAGCGC TCGGTATGTC GCGCGCCACT TTGTATCGGC GCATTGCGTC GTTGGGCATC
GTCGCGCCGC ATCGACGGTG A
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| Protein sequence | MPYVSQTQHI DRVRGAIEGR LPAPADSPRL VSSWQRSFEQ YRLDPGAVIG PRVLSSAELR
EVQGKEEAFL RASGQCLSRL HDMIRVADYC VMLTDAHGVT IDYRIDRDRR SDFKHAGLYI
GSCWSEREEG TCGVANVLTD LAPIIVHKTD HFRAAFTTLT CSAAPIFAPT GEMIGVLDAS
AVQSPDNRDS QRLVFQLVRQ SAGLIEDGYF LNQTSQHWVL FGHSSRNFVE AQPEVLIAFD
ECGNLVAANR KARECIPALN GPRHIDDVFD TSGSHLHDIA RTDAIVGLRL RATGTTLYAR
IRAPLRRISR AASTLNEGAA RSSQSASQND LHLGALGRFL HSAEPRIAHN AAVALRVMGK
RLPILILGET GVGKEVFAHA VHDSGARRAR PFIAVNCGAI PESLIESELF GYAPGAFTGA
RSRGARGKIA QAHTGTLFLD EIGDMPLDLQ TRLLRVLAEG EVTPLGADAP VRVDIDVICA
THRDLTQMVA AGTFREDLYY RLSGASLPIP PLRERADIRD VIEAVFDEEA QMAGHVLTLD
PQLAERLAGF AWPGNIRQLR NVLRYACAIC DSARVELRHV APDMAALLAP EAVHKPALLR
IDPHDGRQRD ALQAPRQDPR EERARIIDAL TRHQWRPNAA AQALGMSRAT LYRRIASLGI
VAPHRR
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