| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5892 |
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| Symbol | |
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| ID | 6277525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2110642 |
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| End bp | 2111817 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642616955 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001889598 |
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| Protein GI | 187920566 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.957036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAGAA TTGCCACTAT CTGTGCTATT TCTGGAGTAC TTGCGACATC GGGCAGCGTT
CATGCGCAGA GCTCGGTGAC GCTTTACGGC CTGATCGACG CAGGTCTGAT GTACACCAAC
AATGTATCGA AGAGCGGCTC GCACGGAGCG CTCGTACAGG CCACGAGCGG CAACATCAAC
GGGAGCCGCT TCGGCATGCG CGGCGCGGAA GACCTCGGCG GCGGGCTGAA GGCAATTTTC
GTGCTGGAGA ACGGTTTTAA CGTTCAAAAC GGCAAATTGG GGCAAGACGG CCGGATGTTC
GGACGGCAGG CGTATGTGGG CCTCAGCGCC ACGCAATTCG GCGCCGTGAC TCTCGGGCGG
CAATACGACT CGCTGGTCGA TTTCGTTGCG CCTTTGTCCG CCACTGCCGG GACTTTCGGC
GACACCGGTT TCGCGCATCC GTTCGACAAC GACAACCTGA ACCACTCGGT ACGGATCAAT
AACGCGGTCA AATACACGAG CGTCAACTAT GCGGGTCTGA CATTCGGTGG CATGTATGCC
TTTTCGAACA ACACCAGCTT TGCTGTGAAT CGTGCCTACA GTGCCGGCGT CAGTTATGCC
TTCGGGCCTT TGACGGCCGC TGCCGGTTAT TTGCAGATCA ACGGCTCGAC GAACACCACT
TCGAGCAGTT CGGGGGCGGT CGATATCGGC GAATCGGCTG CGAATGGCAG TGGCGGATTT
AACCTGGGTG CGGACGTTCA GCGTACCGTG GGCGCTGCGC TCAACTACAA ATTCGGCCCG
GCTGCAGTCG GCTTTGTCTA CACTCACAGC CAGTTTCAAG GGACCACGTC GTTCGGCCAG
ACGAACGTCG GCAACAGCGG CACGATGCGC TTCGATAACT ATGAATTGAA CGCCAAGTAC
GCGCTTACGC CTGCTATCAA TCTCGGCATT GCCGACACCT ATACCGACGG CCACGTGGGC
AATGGCAGCA ACACCGCATA CGGCTCGGAT CCGAAATGGA ACCAGGTTAA CCTGCAAGCC
GTATATTTGC TGTCGAAACG CACGGACGTT TATGTCGAAG GCATGTATCA GCACGTGATC
GGCCACAACT ATGTGGCGTT TATTAACACT GCGGGCGGCG CCTCTGGGAC TTCCAATCAG
GTTGTCGCCA CCGTCGGTTT GCGCACCCGT TTCTAG
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| Protein sequence | MKRIATICAI SGVLATSGSV HAQSSVTLYG LIDAGLMYTN NVSKSGSHGA LVQATSGNIN
GSRFGMRGAE DLGGGLKAIF VLENGFNVQN GKLGQDGRMF GRQAYVGLSA TQFGAVTLGR
QYDSLVDFVA PLSATAGTFG DTGFAHPFDN DNLNHSVRIN NAVKYTSVNY AGLTFGGMYA
FSNNTSFAVN RAYSAGVSYA FGPLTAAAGY LQINGSTNTT SSSSGAVDIG ESAANGSGGF
NLGADVQRTV GAALNYKFGP AAVGFVYTHS QFQGTTSFGQ TNVGNSGTMR FDNYELNAKY
ALTPAINLGI ADTYTDGHVG NGSNTAYGSD PKWNQVNLQA VYLLSKRTDV YVEGMYQHVI
GHNYVAFINT AGGASGTSNQ VVATVGLRTR F
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