Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5886 |
Symbol | |
ID | 6277611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2103300 |
End bp | 2104244 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642616949 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001889592 |
Protein GI | 187920560 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGCGC TCAAGTTGCC GGCCGGAGGG TCGTCCAAGG CCCATCGGAT GCGGCTGAAA AAGCCGCTCA AAAAGCGCTT TCCGATTGCG GCGTGGCTCG CGCTGCTGCC AATGGTCATG ACCGTCGTCT TCGCCTATCT CGGCACGATG GTCTGGACCG CGCGCGTGTC GCTCAGCAAT TCGCGCACAT TTCCGTCCGG CGACTTCGCG GGTTTCACGC AATACGCGCG GCTCTTCAAT AACGACCGCT GGCTGCTGTC GTTGCAGAAC ATCGTGATCT ACGGCGCGTG CTTTATCGTG GCGTGCATGG TGATCGGTTT GCTGCTGGCG ATTTTCATCG ATCAGCGCGT GGTCGCCGAA GGCGCGTTGC GCACGGTGTT TCTCTATCCG TATGCAATGT CGTTCGTGGC GACGGGGCTC GTGTGGCAGT GGATCCTGAA CCCGGAACTG GGCGCGCAGG CCGTGCTGCA CAAGCTCGGA TTCGCACACG CGCGTTTCGA CTGGATCGTC GATCAGGACT GGGTGATTTA CACCATCGTG ATCGCGACCG TGTGGCAGGC CTCGGGTCTG GTGATGGCGT TGTTGCTGGC GGGCCTGCGC GGCATCGACG ACGAGTTGTG GAAAGCCGCG CGCATCGACG GCATTCCGCG TTGGCGGGTC TACGTCAGCA TCGTCGTGCC GATGCTGGGG CCATCCATCT CCACTGCTTT CGTGCTGCTG TTCGTGATGG TCGTGAAGCT CTACGACGCG GTGGTCGCGA TGACGCAAGG CGGCCCCGGC ACGGCGAGCG AAGTGCCGGC GAAGTTCATC ATGGACTATC TGTTCGGCCG CGCCAATATC GGGCTCGCTT CGGCGGCGTC GATCGTGTTG CTGGCCACCG TGCTGGCGAT TCTCGCGCCG TTCTTCTATG CCCGCAGCCG TGCGGCCCTG CGTAAGGAGG TGTGA
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Protein sequence | MHALKLPAGG SSKAHRMRLK KPLKKRFPIA AWLALLPMVM TVVFAYLGTM VWTARVSLSN SRTFPSGDFA GFTQYARLFN NDRWLLSLQN IVIYGACFIV ACMVIGLLLA IFIDQRVVAE GALRTVFLYP YAMSFVATGL VWQWILNPEL GAQAVLHKLG FAHARFDWIV DQDWVIYTIV IATVWQASGL VMALLLAGLR GIDDELWKAA RIDGIPRWRV YVSIVVPMLG PSISTAFVLL FVMVVKLYDA VVAMTQGGPG TASEVPAKFI MDYLFGRANI GLASAASIVL LATVLAILAP FFYARSRAAL RKEV
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