Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5867 |
Symbol | |
ID | 6277431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2080883 |
End bp | 2081617 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642616930 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001889573 |
Protein GI | 187920541 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGAC TGAATGGAAA GACCGCCGTG ATCACCGGTG GCGCTACCGG CATCGGCCGG GCAGCAGCAA AGCGTTTTAT CGAGGAAGGC GCCTTCGTCT TCATCTTCGG CCGGCGGCAG GAAGCACTCG ACGCCGCAGT AGCCGAGCTC GGGCCCAATG CCCGCGCGGT GAAGGGCTCG GTCTCCGATC CCGCCGACCT CGACCGACTT TACTCGGCGG TGAAGGCCGA GCGCGGAACC CTCGACATCG TTTTCGCCAA CGCCGGGACG GGAGGCCTGC TTGCGCTGGG CAAGATCACC GCCGAGCACA TCGACGAAAC TTTCGACACC AACGTAAAGG GGGCGATCTT CACCGTACAG CAGGCGCTGC CGCTGATGGG CAAGGGTGGT TCGATCATCC TGACCGGATC GAGCGCCGGC ACCACGGGCG CCCCGGCAAT GAGCGCCTAC AGCGCGAGCA AGGCGGCAGT GCGCAACCTC GCACGGACCT GGGCGGAGGA ATTGAAGGGC ACCGGCATCC GGGTCAACGT GCTGTCACCC GGGGCGACGG CGACCGAACT CGCTAAGGAA GCGCTAGGCG AAGAAGGCCA GAAGGTCTTC GCCTCGATGA CTCCGCTCCA GCGCATGGCC GATCCGGCAG AGATCGCAGC AGCGGCCGCC TTTCTCGCGT CGCCGGACAG CAGCTTCATG ACCGCCAGCG AGGTTGCCGT CGACGGCGGC CTGGCGCAAC TCTGA
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Protein sequence | MNRLNGKTAV ITGGATGIGR AAAKRFIEEG AFVFIFGRRQ EALDAAVAEL GPNARAVKGS VSDPADLDRL YSAVKAERGT LDIVFANAGT GGLLALGKIT AEHIDETFDT NVKGAIFTVQ QALPLMGKGG SIILTGSSAG TTGAPAMSAY SASKAAVRNL ARTWAEELKG TGIRVNVLSP GATATELAKE ALGEEGQKVF ASMTPLQRMA DPAEIAAAAA FLASPDSSFM TASEVAVDGG LAQL
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