Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5836 |
Symbol | |
ID | 6277371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2040531 |
End bp | 2042735 |
Gene Length | 2205 bp |
Protein Length | 734 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642616900 |
Product | cellulose synthase catalytic subunit (UDP-forming) |
Protein accession | YP_001889543 |
Protein GI | 187920511 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | [TIGR03030] cellulose synthase catalytic subunit (UDP-forming) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.481815 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTACGT CTCCATCGCC GGGCCTCGAG CCCGCCGAGC CGTCGCGGAT CGAACGTTTC ATCGACGCGC GCTTCTGGAA CAGCCGCATC GTCACCGGAC TTGTCACGCT GTTCGCGCTG GTGATGCTGT ACTTCGTGTT CACCGTGCCG CTTGCCTTCT ATGAACAGTT GACGTTCGCG ACCTGTTGCT TCGTCACCGC GCTGATGTTC CGCCGCCTGC AAGGCCGTTA CGCGACGATG GTGATGATCA TGCTGTCGGT GGTCACGTCG GGCCGCTATA TGTACTGGCG GCTGACCGCG ACCACCTACT GGGAGCATCC GCTCGACGCC GGCTGGGGTC TGCTGCTGGT CTCCGCCGAA GTCTATTCGA CCATCGTGCT GCTGCTCGGC TACTTCCAGA CTGCCTGGCC GCTCAAGCGC ACGCCGATGC CGCTGCCGGC CTCGCGCGAC CAATGGCCGA CCGTCGACGT GTTCATTCCG ACCTACAACG AGCCGCTCTC GGTGGTGAAG CCGACCATCT ACGCCGCGCT CGCGCTCGAC TATCCGGCCG AGAAGATTTC GATCCACGTA CTCGACGACG GCCGTCGCCC CGAGTTCAAG GCGTTCTGCG AAGAGGTCGG CGTCAACTGG ACGATCCGCA CGCACAACCG CCACGCGAAA GCCGGCAACA TCAACGAGGC ATTGAAGATC ACCAGCGGCG AATACCTGGC GATCTTCGAC TGCGATCACA TTCCGACCCG CTCGTTCCTG CAGATCGGCC TCGGCTGGTT CCTGCGCGAC AAGCTGCTGT CCATGCTGCA AACGCCGCAC CACTTCTTTT CCGCCGACCC GTTCGAACGC AACCTCGGCA CTTTCCGCAA AGTGCCGAAC GAAGGCGAAC TGTTCTACGG CCTCGTGCAG GACGGCAACG ATCTGTGGAA CGCCACCTTC TTCTGCGGAT CGTGCGCGCT GTTGCGCCGG ACCATGGTCG AGGAGATCGG CGGCATCGCG GTCGAGACCG TGACCGAAGA CGCGCACACT GCCTTGAAGC TGCACCGTCT CGGCTACACC ACCGCCTATC TGGCGATTCC GCAAGCCGCG GGGCTCGCCA CGGAATCTCT CTCCGGCCAC ATCGGCCAGC GGATTCGCTG GGCGCGCGGC ATGACGCAGA TTTTCCGCAT CGACAATCCG CTCACCGGCA AGGGCCTCAA AATCGGCCAG CGCCTGTGCT ATCTGAACGC GATGATGCAC TTTTTCTACG GCATCCCGCG TCTGGTGTTT CTCACCGCGC CGCTGTCGTA TCTGTTCTTC GGCGCGCACG TGATCGAAGC CGCCGCCAGC ACGATCGCGA TCTACGCGCT GCCGCACATG ATGCACGCGA GCATCACCAA CTCGCGCATG CAGCGCTCGT TCCGCCATTC GTTCTGGGCG GAAGTCTATG AGTCGGTGCT GGCCTCGTAC ATCACCGCGC CGACCCTGCT TGCGCTGATC AACCCGAAGC TCGGCAAGTT CAACGTGACG GCCAAGGGCG GCCAGATCGA GAAGAACTAT TTCGACTGGG CGATCTCGCG GCCGTATCTG TTTCTGCTGT TGCTGAACCT GATCGGCTTT TGCGTGGGCG TCGTGCATAT TTACTTGAAC TGGCATGTGC GCAGCGTTGT GCAGACCACC ATCCTCAACC TCGGCTGGAC TACCTACAAC ATGCTGATTC TCGGCGCGAG CGTGGCCGCC GCGAGCGAGC GCCGGCAGAT TCGCGCGGTG CACCGCGTGG CGATGCAGAT GCCCGTCATG CTGAAGTTCT CGACCGGCCG CACACTCGCC TGCGAAACCA TCGACTACTC GGAAGGCGGC GTCGGCGTGG CGCTGCCCGC CGCGATTCAG GTGCCGATGC ACGAGCGCGT GACCGTCTCC CTCTTTCGCG GCGACGAGGA ATACGCGTTC CCCGCGACCG TCGGCTTCAC CGCGCCGGGC CGCGTGGGTC TGCGCTTCTC GGCAATGACG CGCGAGCAAG AATACGAGTT CGTCAAAACC ACCTTTGCAC GCGCCGACGC CTGGACCGGC TGGGCGGAAG GACGGCAGCA GGACACCCCC TTGCGCGGCC TGTCGCATGT GCTGACGGTA GGCGCGCGCG GTATCGCGGG GCTGTTCGAG CATCTTTATG CCGACCTTCG CAGTTCGATG AAAAGCCGTC CAATGGACGT CAAGAAGCTA AAAACGAAAG ACTGA
|
Protein sequence | MSTSPSPGLE PAEPSRIERF IDARFWNSRI VTGLVTLFAL VMLYFVFTVP LAFYEQLTFA TCCFVTALMF RRLQGRYATM VMIMLSVVTS GRYMYWRLTA TTYWEHPLDA GWGLLLVSAE VYSTIVLLLG YFQTAWPLKR TPMPLPASRD QWPTVDVFIP TYNEPLSVVK PTIYAALALD YPAEKISIHV LDDGRRPEFK AFCEEVGVNW TIRTHNRHAK AGNINEALKI TSGEYLAIFD CDHIPTRSFL QIGLGWFLRD KLLSMLQTPH HFFSADPFER NLGTFRKVPN EGELFYGLVQ DGNDLWNATF FCGSCALLRR TMVEEIGGIA VETVTEDAHT ALKLHRLGYT TAYLAIPQAA GLATESLSGH IGQRIRWARG MTQIFRIDNP LTGKGLKIGQ RLCYLNAMMH FFYGIPRLVF LTAPLSYLFF GAHVIEAAAS TIAIYALPHM MHASITNSRM QRSFRHSFWA EVYESVLASY ITAPTLLALI NPKLGKFNVT AKGGQIEKNY FDWAISRPYL FLLLLNLIGF CVGVVHIYLN WHVRSVVQTT ILNLGWTTYN MLILGASVAA ASERRQIRAV HRVAMQMPVM LKFSTGRTLA CETIDYSEGG VGVALPAAIQ VPMHERVTVS LFRGDEEYAF PATVGFTAPG RVGLRFSAMT REQEYEFVKT TFARADAWTG WAEGRQQDTP LRGLSHVLTV GARGIAGLFE HLYADLRSSM KSRPMDVKKL KTKD
|
| |