| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5832 |
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| Symbol | |
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| ID | 6278541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2036510 |
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| End bp | 2037655 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642616896 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001889539 |
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| Protein GI | 187920507 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.361903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAATC CACTCAGTAT TCTTCTGGTC ACCGTGTTGT CGAGCGCCAT GGCGATGGCC
GTGCTTGGCT CGTTGTGGCG CGCGGCGATT CCAGGCGTCG GTTACTGGAT CTCGGCCAAC
GCGATCGCGA TCGTCGCGTT GCTGGCTTTT GCTTTGCAAG GCCATGGGTC GCGCTGGCTG
ACCTTCGTGG CGTCCAACGT GTTGCTGGCC GCTTCGCTGC TTATGGTGGT CGAAGGCTGT
TTGCGCTTTC TGGGCCGACG CGTGCGGCCG TGGCCGGCGT ACATCGGCCT TGTCGTCGTG
CTGTTCGGCA TCTCGTACTG GACCTTCGCC GCGCCGGATT TCAACGCGCG CGTCGCGCTG
GTGTCGGCGT TTCACGCGGC ACTTTATGCC GCGCTCGCCG CGCTCCTGCT GCGCGGCCGT
CCCGCGAACC GGCCGCGCTA TAGCTACTAT TTCCTCGCGG TGGCAGCGCT GCTGCTATGC
GCCGGGCATA CGTCGCGCGG GCTTATGTAC GGCTTCGGTC TGCTGACGCA AAGCAGCCTG
ATGCAAGTGT CGCCGTCCAA CATCATTTTT CTCGCGCTCG GCATTCTTGC GCCGCCCTGT
CTTTCGATCG GCGTGGTGAT GCTCGCGCAC GACCGCCTCG CCGAACGGCT CGAACGGCTG
GCCAATGTCG ACGACCTGAC CGGCGCGCTG TCGCGCCGCG CGTTTCTGGC GATCGGCGAC
GCGCTGCTGA AAGCCTCGCT GCGCACCCGC TCGCCGGTGG CGCTGGCGAT CATCGACATC
GACTCGTTCA AGGCCGTCAA CGACAACTAC GGCCACGCCG CGGGCGACCA GGTGCTCAGC
CACTTCGCGA CCTTCGTCGC CCGCAACCTG CGGGTCGGCG ATGTATTCGG CCGGCTGGGC
GGCGAAGAAT TCGGCGTGCT GTGCCCGGCC ACCACCACCG CCGAAGCGGT GAGCCTGCTC
GACCGTCTGC GGGGCCGGCT GGCCGGGGCC GCGGCGGACG AGTTGCCGCG TGGGCTGCGG
TACACCTTCA GCGTCGGCGT GGACCAGTTG CGGCGCGACG AATCGCTCGC CCAGTTGATG
GCGCGCGCGG ACGGCGCGCT GTATGCGGCC AAGGCGTCGG GCCGTAATCG CGTAATGGCG
GCATAG
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| Protein sequence | MLNPLSILLV TVLSSAMAMA VLGSLWRAAI PGVGYWISAN AIAIVALLAF ALQGHGSRWL
TFVASNVLLA ASLLMVVEGC LRFLGRRVRP WPAYIGLVVV LFGISYWTFA APDFNARVAL
VSAFHAALYA ALAALLLRGR PANRPRYSYY FLAVAALLLC AGHTSRGLMY GFGLLTQSSL
MQVSPSNIIF LALGILAPPC LSIGVVMLAH DRLAERLERL ANVDDLTGAL SRRAFLAIGD
ALLKASLRTR SPVALAIIDI DSFKAVNDNY GHAAGDQVLS HFATFVARNL RVGDVFGRLG
GEEFGVLCPA TTTAEAVSLL DRLRGRLAGA AADELPRGLR YTFSVGVDQL RRDESLAQLM
ARADGALYAA KASGRNRVMA A
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