Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5807 |
Symbol | |
ID | 6277438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2012220 |
End bp | 2012867 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642616871 |
Product | SNARE associated Golgi protein |
Protein accession | YP_001889514 |
Protein GI | 187920482 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.468515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.433949 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTGA TGCATGTACT GCAGGTCGCC CTGCACTTCG ACCAGCACCT GAGCGGCCTG ATCGTGCAAT ACGGCACCGC CGTCTACGCG ATGCTGTTTC TCGTCGTGTT CGTCGAGATC GGTTTTTTGC CGCTGTTCTT CCTGCCCGGC GATCCGCTGA TTTTCATTTG CGGCGGTCTC GCGGCCACCG GCGCGCTGAA TGTCTGGCTC GTGATTCCGG TGCTGTTCGC CGCAACGGTG GCGGGCAGTA TCGTCGACTA CGCGATCGGA CGGGCGATCG GCGAGAAAGT CTATACCGCC GACTATCGCT GGCTCGACAA GAACGCGCTG CGCAAGGCGC ACGCGTTTTA CGAAGCGCGC GGCGGGCTGA CCTTTCTGCT GTCGCCGTTC ATCGCCGTGG TGCGCACCTT CGCGCCGTTC GTCGCCGGCG TTTCGCGCAT GACGTTCGCG CGTTTTGTGT CGTTCGTCAC CGCGGGCGCG GCGTTATGGA TCGTGTCGCT GGTGGCGGCC GGCTATCTGT TCGGCAACGT GCCGCTGGTG CGCGATCACA TGAGTTCGAT CGTGCTGTTA GGCGTCGCGC TCGGCGTCGG CTCGCTGCTC ATGAGCGCCG TGTGGCGCTT CGTCAACCGG CGTTTGCGCG CGCGCTGA
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Protein sequence | MDLMHVLQVA LHFDQHLSGL IVQYGTAVYA MLFLVVFVEI GFLPLFFLPG DPLIFICGGL AATGALNVWL VIPVLFAATV AGSIVDYAIG RAIGEKVYTA DYRWLDKNAL RKAHAFYEAR GGLTFLLSPF IAVVRTFAPF VAGVSRMTFA RFVSFVTAGA ALWIVSLVAA GYLFGNVPLV RDHMSSIVLL GVALGVGSLL MSAVWRFVNR RLRAR
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