| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5740 |
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| Symbol | |
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| ID | 6279251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1942358 |
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| End bp | 1943569 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616810 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001889453 |
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| Protein GI | 187920421 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.917391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATAAGT CCCTCGCAAC CTCCTCGAAA CCTCTCGCCG CACACGTGGC ATTCGCATTC
GCCGCGCTTG CCGCTGCGGG AGCGCCGGCA GCAGTTCACG CGCAAAGCAG CGTGACGCTA
TACGGCATCA TCGACGAGGG CATCAACTAC ACGAGCAACG TACAAACGGG CCCGGGCCAG
GGCCACAGCC AGTACAACCT GTCGAGCGGC ATTCTGAGCG GCAGCCGTTG GGGCCTGCGT
GGCAATGAAG ATCTGGGCGG CGGCATCAAG GCGATCTTCG TGCTCGAAAG TGGTTTCGAC
GTGAACAGCG GCAAGATGGG TCAAGGTTCG CTGCTGTTCG GCCGCCAGGC GTATGTAGGG
GTCTCGAGCC CGTACGGCAC GGTCACGCTC GGCCGTCAGT ACGATCCGGT GGTCGACTAC
ATCCATCCGC TGATGCCGAG CGCGATGTTC TCGGGCAGCA TCGGCGCGCA TCCGGGCGAC
CTCGATAACC TCAACAACAC CAATCGCGTG AACAACGCGG TCAAGTACCG CACGGCCAGC
TATGGAGGCT TGACCGCGGA AGGCATGTAT AGCTTCGGTG GCGTGCCGGG CAGCATGGCC
GGCAACCAGA TCTACTCGCT CGGCGCCGGT TACGCTCGCG GGCCGCTCAC GGTCGGCGTC
GGCTACCTGA ATGCGCGCAA TCCGAATGCC TCTTTCTTCG GTACGGCAGT CGGCGCGACG
GCGGCCACCA ACAACTTCGG CAGCTCGCCG GTGATCAACG GCTATGCCTC GGCGCACAGC
GAAGAGATCA TCAGCGCCGG CGCCACCTAC GTGATCGGCG CGGCGACTCT CGGCGGGATC
TATTCGAACA CGAAATTCAA GCATCTGAGC GGCGCGGTGT CACCGCTCAA TCCGGCCGGC
GTAGGCGGCA CTGCGAGCTT CAACAGCGCT GAAGTCAACT TGCAGTATCA GTTGACGCCG
GCGCTCTCGT TCGGCGCAGC CTACAACTAC ACCGACGGCG GCGATGCGAA TCACGCGAAA
TATCAACAGG GCTCGCTGAG TGCCGACTAC ATCGTCTCCA AGCGCACCGA TTTCTATCTG
ATCGGCGTTT TGCAGCACGC GTCGGGCACC GATTCGACCG GGCGCGCAGC GCGTGCCTCG
CTCAATGGTC TGACGCCTGC GTCGGGTAAC CAGCAGGCGA CGGTCCGTTT CGCGATCCGC
CACAAGTTCT GA
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| Protein sequence | MHKSLATSSK PLAAHVAFAF AALAAAGAPA AVHAQSSVTL YGIIDEGINY TSNVQTGPGQ
GHSQYNLSSG ILSGSRWGLR GNEDLGGGIK AIFVLESGFD VNSGKMGQGS LLFGRQAYVG
VSSPYGTVTL GRQYDPVVDY IHPLMPSAMF SGSIGAHPGD LDNLNNTNRV NNAVKYRTAS
YGGLTAEGMY SFGGVPGSMA GNQIYSLGAG YARGPLTVGV GYLNARNPNA SFFGTAVGAT
AATNNFGSSP VINGYASAHS EEIISAGATY VIGAATLGGI YSNTKFKHLS GAVSPLNPAG
VGGTASFNSA EVNLQYQLTP ALSFGAAYNY TDGGDANHAK YQQGSLSADY IVSKRTDFYL
IGVLQHASGT DSTGRAARAS LNGLTPASGN QQATVRFAIR HKF
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