| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5691 |
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| Symbol | |
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| ID | 6278861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1895580 |
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| End bp | 1896332 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616764 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001889407 |
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| Protein GI | 187920376 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.345481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGAA TCGATCTGGA GGGGCGCGTC GTCGCCATTA CCGGCGGCGC GCGTGGCATC
GGCTACGCGG TGGCGCAACG GGCGCTGAAC TCGGGCTCGT CGGTCGCGCT ATGGGACGTG
GACGCCGAAC GCCTCGCGCG CAGCCAGCGT GAGCTCAGCG AACTGGGCAA AGTCACCGCG
GTCTGCGTCG AACTCACGCA GGAAGCCGCC GTCGCGCAGG CCGTGGCGCA AACAGTCGCT
GATCACGGCG CGATCGACGT GCTGATCAAC TGCGCCGGCA TCACCGGCGG CAACGGCACC
ACGTGGGAAC TGGAACCCGA CGTCTGGCGC CGCGTGATCG ACGTCAACCT GATCGGCCCG
TATCTCACTT GCCGCGCGGT CGTGCCGCAA ATGCTCAAGC AGGGCTATGG CAGGATCGTC
AATATCGCGT CGGTGGCCGG CAAGGAAGGC AACCCGAACG CCTCGCACTA CAGCGCCTCC
AAGGCAGGCC TTATCGGCCT GACCAAATCG CTCGGCAAAG AACTGGCAAC GAAGAACATT
CTCGTCAATG CCGTCACGCC CGCCGCGGCC AAAACCGAAA TCTTCGACTC GATGTCGCAA
CAGCACATCG ACTACATGCT CTCGAAGATT CCGATGAACC GCTTTCTGAT GCCCGAAGAA
GCGGCGTCGC TGATTCTGTG GCTCTCGTCG GAGGACTGCG CGTTCAGCAC CGGCTCGGTA
TTCGATCTGT CCGGCGGCCG CGCAACATAC TGA
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| Protein sequence | MNRIDLEGRV VAITGGARGI GYAVAQRALN SGSSVALWDV DAERLARSQR ELSELGKVTA
VCVELTQEAA VAQAVAQTVA DHGAIDVLIN CAGITGGNGT TWELEPDVWR RVIDVNLIGP
YLTCRAVVPQ MLKQGYGRIV NIASVAGKEG NPNASHYSAS KAGLIGLTKS LGKELATKNI
LVNAVTPAAA KTEIFDSMSQ QHIDYMLSKI PMNRFLMPEE AASLILWLSS EDCAFSTGSV
FDLSGGRATY
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