| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5623 |
|---|
| Symbol | |
|---|
| ID | 6280262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 1825932 |
|---|
| End bp | 1826720 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642616697 |
|---|
| Product | class II aldolase/adducin family protein |
|---|
| Protein accession | YP_001889340 |
|---|
| Protein GI | 187920309 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.136767 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGC TTCCCGAATT CTCCATTCCA TCGATGTTCG AGCAATGCTC GGAAGCCGAA
TGGAAAATGC GCGTCGACCT CGCTGCATGC TACCGGCTGA TAGCGCTATA CGGCATGTCC
GACATGGCCG CCAACCATAT CTCGGCGTGC GTGCCGGGCG AAGAAGGCTC GTATCTGATC
AATGCTTACG GCATGCTGTA CGAGGAAGTC ACAGCATCGA GCCTGATCAA GATCGATATC
GACGGAAACA TTCTCAGCAA GCCGGCGTTC GTTGGCGCGG ACTACGGCAT CAACCGCGCG
GGATACGTGA TTCACGGCGC GATTCACGAG GCGAAGCCCG AACTCGAATG TGTGATCCAT
ACGCATAGCT GGCCGGGCAT GGCCGTGTCG GCGCTTAAGT GCGGGCTGCT GCCGCTCACG
CAGACTTCCA TGCGCTTCTA CAAGATCGGC TATCACGATT ACTGCGGCGT GGTGCTGGAT
GTCTCCGAGC GTGAGTCGCT GTTGCGCGAT CTTGGCGAGA ACAATGCGCT CATTCTGCGC
AATCACGGCC TGCTTACCGT CGGCAAGACC ATTCCCGAAG CGTTCAACGC CATGCATCGG
CTGGAGTTAT CTTGCAGGAC GCAACTCGCA GCCATGGCGT GCAATACCGA ACTGAATCCG
GTTCCGCGCG ACGTGCTCGA AGAAACATAC ATGAACTATC AACCACAGAC GCGCCGCCCG
TACGGCTTGA TGGAATGGCC TGCGTTGCTG CGCAAGCTGG ATCGCATCGA TCCATCTTAT
CGCGACTGA
|
|---|
| Protein sequence | MTKLPEFSIP SMFEQCSEAE WKMRVDLAAC YRLIALYGMS DMAANHISAC VPGEEGSYLI
NAYGMLYEEV TASSLIKIDI DGNILSKPAF VGADYGINRA GYVIHGAIHE AKPELECVIH
THSWPGMAVS ALKCGLLPLT QTSMRFYKIG YHDYCGVVLD VSERESLLRD LGENNALILR
NHGLLTVGKT IPEAFNAMHR LELSCRTQLA AMACNTELNP VPRDVLEETY MNYQPQTRRP
YGLMEWPALL RKLDRIDPSY RD
|
|---|
| |