Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5612 |
Symbol | |
ID | 6280092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1813896 |
End bp | 1816406 |
Gene Length | 2511 bp |
Protein Length | 836 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642616689 |
Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
Protein accession | YP_001889332 |
Protein GI | 187920301 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0474] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0803944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGACGA GTTCCGTTCA ATCCGTTCCG GACATAAGCT CTGGCCACAT CGGATCGGCA CCGCCGCTCG CGCACGCCGA GAGGAAGCGT GGACTGTCGA GCCGGCAGGT GGAGGAGTCG CGCGCCCGCT TCGGTCGAAA CATCGTGGAC TCAAAGGTTC GCCGCACCTG GTGGCAAACG CTGGGAGAGG GGCTCCGTGA GCCCATGTTT CTTCTACTCC TCGGCGCAAC CGGCATCTAT TTTCTGCTTG GAGATGTGTC GGAGGCGCTC GCGCTTCTCG CGTTTGTCGC CGCAATTGTC TTTCTGACGG TCTTTCAAAG CCATCGTACG GCGCGGGTGC TCGACTCTCT TCGCGAGCTG TCCGCGCCCC GTGCGCAAGT ACTGCGGGAC GGGCAGCGGC AACTCGTTGC CGCCGCCGAA CTGGTGCCGG GCGACCTGGT TTTCGTCCGG GAAGGCGCGC GTGTGCCGGC CGACGGTTCA GTGACGGAGG CTCACGAACT GAGCGTAGAC GAGTCGCTAC TGACAGGCGA GTCCGTTTCG GTGAGCAAGT CCGTGGCACG AGCCGATGCA CGTGCAGAGG AGGATCCTGG CGGACAGCTT ATTTTCGGGT CGATGGTGGT GCAGGGTCAG GGGCAGATGA TCGTGACGGC GACGGGGGCG AATACGAAGC TTGGTCGCAT TGGCAAGTCG TTGACCGGCA TTACGGAAGC CCGCTCGCCG CTGCAACTGG AAACGAGAAC CTTCGTCAAT CGCTTTACGT TGGCCGCGAT CATACTGTGT CTGCTGCTCG TCGTGGCCTA TCGCTTGCGC TCCGGGGAAT GGCTTCCGGG CGTGCTCGCG GGAATCACGC TGGCCATGGG GATTCTTCCC GAAGAGATTC CGGTGATACT GACCGTTTTC ATGGCACTTG GGGCTCGCCG AATCGCCAGT GAAGGCGTGC TGACACGCCG TATGAGCGCC ATCGAAACGC TCGGCCAGAC CTCGGTGCTG TGCGTCGACA AGACGGGCAC ATTGACGCAA AACCGCATGT CCGTGCGCGT GCTGTCTGCG CAAGGAAAAC GGCAGGTCAT CGATCCGACG ACGCAACGGA TCGACGAGGC GTATCACGAA CTCATCGAGT ATCTGGTGCT CGCCAGCGAA ATCGAACCGA TCGATCCAAT GGAGCGGGCA TTTCACGAAA CAGGCCGGGT TGAACTCGCC GGCACCGGAC GGCTCCACGA CGACTGGTCC CTGGTTCATG AATACGCGCT GACACCGGAA TTGCCGGCCA TGTCCCACGC ATGGCACGCG CCTGAACTCG ATCATCACGC CGTGGCCTGC AAGGGCGCGC CAGAAGCGGT CTGTGCCTTG TGTCGTCTGG ACGAACGGGA TACGCAGACT GTTCTTGATG AGGCGGCGCA AATGGCGTCG GGTGGACTGC GGGTGCTTGG GGTGGCCAAG GCACGGCACT CACATTCCGG CTGGCCGGAA AAGCAGCACG ACTTCGAGTT CTCTTTCGTA GGGCTGGCCG GGTTGCTGGA TCCGGTCCGG CCAGAGGCCG CGGGCGCTAT CGCCGCATGC CAGGCCGCCG GCATCCGTGT GGTGATGATT ACCGGCGATT ATCCGTCGAC GGCGCGGGCT ATTGCGACTG AAGTCGGTAT CGACGGCACG CGGATCGTGA CTGGCCAGGA AGTGGCTGCG ATGAATGACG CGCGGCTTCG CGAGGCCATA ACGAACGTGG ACGTGTTTGC ACGTGTCAAG CCAGAGCAAA AATTGCGGCT CGTCAATGCG TTCAGGGAAA GTGATCAGGT GGTGGCGATG ACGGGCGACG GTGTAAACGA CGCGCCCGCG CTTAAGGCGG CGCACATCGG CATTGCGATG GGACTGCGCG GCGCCGAAGT CGCGCGCGAG GTGGCATCGC TGGTCTTGCT GCGTGACGAC TTCGCGCCGA TCGTGTCGGC GATCCGACTA GGAAGACATA TTTACGTCAA TCTCCTGCAG GCAATCAGCT ATACGGTCGC TGTTCATATT CCGATGATCG CCGCAGCCAT GATTCCGGTT TTCGTCGGCT GGCCTCCGTT GCTCGCGCCC GTTCATATCG TCTTTCTCGA GCTGATTATC AACCCCGTCT GCTCGATCGT GTTCGAGAAC GAGCCGGAAC GCGAGAACCT GATGCATATG CCACCGCGCC GTGCCGGCGC GCGTCTTCTG TCGAACAGCA CATTGGGAAA AGCGGCAATG GCGGGCGCGT TAGCCGCCAT GCTGATGCTC GGTCTGTATG CAGCCTTGCT GAGCCTCAGC TACGACCTTA CTTTCTCACG CACAGTGTCG TTCATGGCGC TCGTGGCGTG TAATGTGGCT TTGATCTTCG TGATCCGCTT ACTTCCTCAG CCGCGGGCCT ATGCACGCGC ACGACAGCGG AATCGCTACC TCTGGGTTGT ACTAGGTGTC GTTGGCACGG GGCTTCTGCT TCTCATGACC GTACCCGCCC TGGCGCGGCT GTTCGGACTG GTCGCGTTGC TAAGCGCCTG A
|
Protein sequence | MQTSSVQSVP DISSGHIGSA PPLAHAERKR GLSSRQVEES RARFGRNIVD SKVRRTWWQT LGEGLREPMF LLLLGATGIY FLLGDVSEAL ALLAFVAAIV FLTVFQSHRT ARVLDSLREL SAPRAQVLRD GQRQLVAAAE LVPGDLVFVR EGARVPADGS VTEAHELSVD ESLLTGESVS VSKSVARADA RAEEDPGGQL IFGSMVVQGQ GQMIVTATGA NTKLGRIGKS LTGITEARSP LQLETRTFVN RFTLAAIILC LLLVVAYRLR SGEWLPGVLA GITLAMGILP EEIPVILTVF MALGARRIAS EGVLTRRMSA IETLGQTSVL CVDKTGTLTQ NRMSVRVLSA QGKRQVIDPT TQRIDEAYHE LIEYLVLASE IEPIDPMERA FHETGRVELA GTGRLHDDWS LVHEYALTPE LPAMSHAWHA PELDHHAVAC KGAPEAVCAL CRLDERDTQT VLDEAAQMAS GGLRVLGVAK ARHSHSGWPE KQHDFEFSFV GLAGLLDPVR PEAAGAIAAC QAAGIRVVMI TGDYPSTARA IATEVGIDGT RIVTGQEVAA MNDARLREAI TNVDVFARVK PEQKLRLVNA FRESDQVVAM TGDGVNDAPA LKAAHIGIAM GLRGAEVARE VASLVLLRDD FAPIVSAIRL GRHIYVNLLQ AISYTVAVHI PMIAAAMIPV FVGWPPLLAP VHIVFLELII NPVCSIVFEN EPERENLMHM PPRRAGARLL SNSTLGKAAM AGALAAMLML GLYAALLSLS YDLTFSRTVS FMALVACNVA LIFVIRLLPQ PRAYARARQR NRYLWVVLGV VGTGLLLLMT VPALARLFGL VALLSA
|
| |