Gene Bphyt_5606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5606 
Symbol 
ID6280125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1807734 
End bp1808990 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content64% 
IMG OID642616683 
Producthypothetical protein 
Protein accessionYP_001889326 
Protein GI187920295 
COG category[S] Function unknown 
COG ID[COG1306] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.278011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACAC TTCCCTTCCT GCGCCATGTC GCTGTCGCGC TGACCATTCT GTCGACGGGC 
GTGACGGCCG GCGCCGCAAC GGGCATCGTG ATCGACGCGG CCACCGCCAA ACCCGTAGCG
CACGCGCTCG TTACAACGAC TGCCGGCGTA CAGCAAGCCG ATGTCGACGG GCAGTTCGAG
TTCGACTCGT CCGTCTCCAG CGTCGGCGCC CGGGCGCCCG GCTATCTGCG CACGCAAGCC
GATGTGACCG GCGAGACGCC GTTGACGCTC AAGCTCACGC CGTTTCGCCC CAAAGCCGTG
TACCTGTCGG TATATGGCGT CGCAAGCCCG ACGTTGCGCG AGGAGGCGCT CGCGCTTACG
CAAACCACGC CGATCAACGC ACTGGTGATC GACGTCAAGG GCGACCGTGG TCTCACGCCT
TATCACAGCG CCGCCCGCGA CGCGGCCGGC GCTTCGGCGC GGCTACCTCG CCGCGAGCCA
TTGGTGCGGG ACTTCCCGGC ACTTCTCGCC GAGTTTCATC GCCGGCATCT TTACCTGATT
GCACGGATCG TCGTGTTCAA GGACGACCCG CTTGCCGATG CTCATCCGGC CTGGACCGTG
CGCGATGCGG GCGGTCAACC GTGGCGCGAC CGCGAGCATT TGCAGTGGCT CGATCCTTTT
TCGCGCGAGG TGTGGCAGCA CAATCTCGAC GTCGCTGAGG AAGCCGCAAA AATGGGCTTC
GACGAAATCC AGTTCGACTA TGTCCGCTTT CCCGATGCAA GCGGCCTTCA CTTCTCTCAA
GCCAACACGC GAGTCAATCG CACAGCGGCG ATCGTAGGTT TTTTGCAGGC GGCACGAGCG
CGCCTCGCGC CCTACAACGT CTTTGTCGCG GCGGATATCT TCGGCTACGT CTGCTGGAAC
CTGGACGACA CCGCGATCGG GCAACAGATC GAGCTGCTCG GCGCACCGCT CGACTACATC
TCGCCGATGC TATATCCCTC CGGCTTCACG TGGGGACTGC CGGGCTGTAC CAATCCAGTA
ACGGATCCCG GCCAGATTGT GCGCCGCTCG CTTGCCGAGG CAGTGCGGCG CACGCACTTG
CCAGGCGTGC GGTTTCGCCC ATGGTTGCAG GCATTCCGCG ACTATGCGTT CGACCACCGG
GAATTCGACG CCGCGCAAAT CCGCGCGCAG ACCGCTGCCG CTGATGCCGT CGGCAGCGAC
GGATGGATGC TATGGAACCC GCGCAATCGC TACGACCCTG CAGATCTTCC GCAATGA
 
Protein sequence
MRTLPFLRHV AVALTILSTG VTAGAATGIV IDAATAKPVA HALVTTTAGV QQADVDGQFE 
FDSSVSSVGA RAPGYLRTQA DVTGETPLTL KLTPFRPKAV YLSVYGVASP TLREEALALT
QTTPINALVI DVKGDRGLTP YHSAARDAAG ASARLPRREP LVRDFPALLA EFHRRHLYLI
ARIVVFKDDP LADAHPAWTV RDAGGQPWRD REHLQWLDPF SREVWQHNLD VAEEAAKMGF
DEIQFDYVRF PDASGLHFSQ ANTRVNRTAA IVGFLQAARA RLAPYNVFVA ADIFGYVCWN
LDDTAIGQQI ELLGAPLDYI SPMLYPSGFT WGLPGCTNPV TDPGQIVRRS LAEAVRRTHL
PGVRFRPWLQ AFRDYAFDHR EFDAAQIRAQ TAAADAVGSD GWMLWNPRNR YDPADLPQ