| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5592 |
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| Symbol | |
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| ID | 6278057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1790899 |
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| End bp | 1792035 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642616669 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_001889312 |
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| Protein GI | 187920281 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00756234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGCA TCCTCCAACT CGCATTCAAG CTGCTCGTCA ACGACAGCGC CAAATTCACG
GCACTGCTCG TCGGCATTAC ATTCGCGGTT TTTTTGATGG TCGAAATGAC TTCGCTGTTT
GCCGGCATCC TGAACAAATC GTCGTCGACG GTGATCAATG TCGGGGCGAA GATGTGGGTG
ATGGACCCGG CAGTGCAGAC CATCGCGAGC AGCATCGGCA TGCCGGATTA CGTACTCGAT
GCGGTACGCA GCACCGACGG CGTCAAATAC GCGGTGCCGC TGTACTCAGG CACCGCGCTG
GTCAAACTGC GCGACGGCAC CTATCAGGCA GTCACGGTGA TCGGACTCGA CGACGCCAGC
CTGTTCGGCT GGCCGGTCAT GAAGCAGGGC AAGATCGAAG ACATTTACGC GGAGAATGGC
TTTGTCGCTA TCGACGACGC CGAATTCGTC AAGCTGAAGA ACCCGACACT CGGCACCGAT
TTCGAACTGA ACGACCATCG CGGCGTGATA GTCGGCATCG CGACGGTGGC GAGCAGCGGT
CTCTTTGGCA CACCCACGCT CTACACCACT TACAAACGCG CCGTTACCTA TATCCCCACG
ACCCGCTACA CGACCTCGTA CATCCTGGTT GAACCAAAAT CCGCTGCGGA TATCGCGCAC
ATCAAACAGG TGGTGCAATC GCTCGGCTAC GTCGCGTTCA CGAAAAAGGA ATTCATGGCG
CGCATTTCGC ATTTCTATAA ATACGAAACC GGCCTTGGCA CCAACATCAT GCTGATGACG
GTCATCAGTT TCATTGTCGG GTTGTCCATC TCGGGGCAAA CGTTCTATAC GTTCATCCTC
GAAAACCTCG AAAAGTTCGG TGCGCTGAAG GCGATTGGCG CGAAACGCCA TGAGCTGATC
GCGATGATCC TGTTTCAGGC CACCTTTACG GCGCTGACCG GCTATGGCCT CGGCATCGGC
CTGTGCGCGG CGCTGATCAG TCTCGCCAGG ATACGCATTC CCGATTACGC GGCAATCATC
ACCTTCGGCA ATCTGGCGCT TGCGTTCGCC ATGGTGGTGG TGATTGCCGC GATGTCGAGC
TACCTGGGCA TTCGACGCGT ATTGAGCATC GAACCCTTCG ATATTTTTCG GGGCTGA
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| Protein sequence | MKGILQLAFK LLVNDSAKFT ALLVGITFAV FLMVEMTSLF AGILNKSSST VINVGAKMWV
MDPAVQTIAS SIGMPDYVLD AVRSTDGVKY AVPLYSGTAL VKLRDGTYQA VTVIGLDDAS
LFGWPVMKQG KIEDIYAENG FVAIDDAEFV KLKNPTLGTD FELNDHRGVI VGIATVASSG
LFGTPTLYTT YKRAVTYIPT TRYTTSYILV EPKSAADIAH IKQVVQSLGY VAFTKKEFMA
RISHFYKYET GLGTNIMLMT VISFIVGLSI SGQTFYTFIL ENLEKFGALK AIGAKRHELI
AMILFQATFT ALTGYGLGIG LCAALISLAR IRIPDYAAII TFGNLALAFA MVVVIAAMSS
YLGIRRVLSI EPFDIFRG
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