Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5574 |
Symbol | |
ID | 6280431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1774395 |
End bp | 1775876 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642616652 |
Product | arginine/ornithine antiporter |
Protein accession | YP_001889295 |
Protein GI | 187920264 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATC TGGCAGATTC ATTGACGGGA GCGTCGGTTC CGAGACCGGC CGCTCAAACC GCGGCGCAGA CGGCGAAACC TTTGCGGCTC GGCCTGCTGA CGGCGCTGGT GATCGGGTCG ATGATCGGCA GCGGCGTGTT TTCCTTGCCG CAGAACATGG CGTCGGGCGC GGGCGCGGCC GCCGTGCTGA TCGGCTGGCT GATCACCGGC GTGGGCATGC TCACGCTGGC CTTCGTCTAT CAGACCTTAT CGACGCGAAA ACCGGAGCTC GATAATGGCA TCTACGCATA TGCGCGCGCC AGCGCCGGCG ATTTCGTCGG TTTCAATTCA GCCTGGGGCT ACTGGGTCAG CGCATGGATT GGCAACGTCG GCTATCTGGT CATCGTGTTC GGCACGCTCG GCTATTTCTT TCCTGTATTC GGAGACGGCA ACACGCGCGC TGCGGTGCTG GGCGCATCGA TTGTGCTTTG GATCATGCAT GCGGTCATCC TGCGCGGTGT GCGTAGCGCG GCGGTTCTGA ACGCGATCAC CACCGTCGCC AAGGTGATTC CTCTGCTGGT GTTCATCCTG TTAGCGCTCG CAGCGTTCAG AAGCCATGTT TTTGCCCAGG ACTTCTGGGG CAGCTCAAAA CTCGGCAACG TATTCACGCA GGTCAAAAGC ACGATGTTGA TCACGGTCTG GGTGTTCATC GGCATCGAGG GCGCCAACGT GTTTTCGGCA CGGGCGCAAC GCCGTCAGGA TATCGGGCGC GCAACGCTGC TCGGGTTTAC CGTCGTCTTG CTGCTGCTGA TGGCGGTTTC TTTGCTGTCG CTCGGCATCG TCCCGCAAAG CGAACTGGCC GCGATGAAGA ATCCGTCGAT GGCCGGCGTG CTCGACAAAG CCGTCGGCAC GTGGGGCGCC GTATTGATCA GCATCGGCTT GCTGGTGTCG GTGGGTGGCG CGTTGCTGGC CTGGACGCTG CTGGCGGCGG AAACGCTTTT CACGCCGGCG AGCGGCGGTG TGATGCCAAC GTTTCTCGCC CGGCAAAACA GCCACGGCGT GCCGGCCAAC GCGCTCTGGC TGACCAATGG CCTCGTCCAG CTCTTCCTGA TCATCACACT GGTGTCCAAC GCGACCTATC AGGCGCTGAT CTCGCTCGCG ACTTCGATGA TCCTGATCCC CTATCTGTTC TCCGCAGTGT ACGCAACCCG GATCGCGATG CGCGGCGACG GCTACACGAT AACGGACACA ACACGCAGCC GCGACACGCT GATCGGCGCA ATGGCGACCG TCTATTGCTG TTGGCTGCTC TATGCAGCCG GCCCGAAGTA TCTGTTGCTT TCGGCCCTGC TCTACGCGCC GGGCGTGCTT CTGTTCGGCT GGGCGAAACG CGAGCGCGGC GCCAGTCTTT TCAAGCCCTT TGAAGTCGCC ATCCTGGCCG CCCTGATCGC TCTTGCGGCG CTTGCGGCGT GGCTGCTGTC GAGCGGCGCG CTGGGCCTGT AA
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Protein sequence | MKNLADSLTG ASVPRPAAQT AAQTAKPLRL GLLTALVIGS MIGSGVFSLP QNMASGAGAA AVLIGWLITG VGMLTLAFVY QTLSTRKPEL DNGIYAYARA SAGDFVGFNS AWGYWVSAWI GNVGYLVIVF GTLGYFFPVF GDGNTRAAVL GASIVLWIMH AVILRGVRSA AVLNAITTVA KVIPLLVFIL LALAAFRSHV FAQDFWGSSK LGNVFTQVKS TMLITVWVFI GIEGANVFSA RAQRRQDIGR ATLLGFTVVL LLLMAVSLLS LGIVPQSELA AMKNPSMAGV LDKAVGTWGA VLISIGLLVS VGGALLAWTL LAAETLFTPA SGGVMPTFLA RQNSHGVPAN ALWLTNGLVQ LFLIITLVSN ATYQALISLA TSMILIPYLF SAVYATRIAM RGDGYTITDT TRSRDTLIGA MATVYCCWLL YAAGPKYLLL SALLYAPGVL LFGWAKRERG ASLFKPFEVA ILAALIALAA LAAWLLSSGA LGL
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