Gene Bphyt_5574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5574 
Symbol 
ID6280431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1774395 
End bp1775876 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content62% 
IMG OID642616652 
Productarginine/ornithine antiporter 
Protein accessionYP_001889295 
Protein GI187920264 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID[TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATC TGGCAGATTC ATTGACGGGA GCGTCGGTTC CGAGACCGGC CGCTCAAACC 
GCGGCGCAGA CGGCGAAACC TTTGCGGCTC GGCCTGCTGA CGGCGCTGGT GATCGGGTCG
ATGATCGGCA GCGGCGTGTT TTCCTTGCCG CAGAACATGG CGTCGGGCGC GGGCGCGGCC
GCCGTGCTGA TCGGCTGGCT GATCACCGGC GTGGGCATGC TCACGCTGGC CTTCGTCTAT
CAGACCTTAT CGACGCGAAA ACCGGAGCTC GATAATGGCA TCTACGCATA TGCGCGCGCC
AGCGCCGGCG ATTTCGTCGG TTTCAATTCA GCCTGGGGCT ACTGGGTCAG CGCATGGATT
GGCAACGTCG GCTATCTGGT CATCGTGTTC GGCACGCTCG GCTATTTCTT TCCTGTATTC
GGAGACGGCA ACACGCGCGC TGCGGTGCTG GGCGCATCGA TTGTGCTTTG GATCATGCAT
GCGGTCATCC TGCGCGGTGT GCGTAGCGCG GCGGTTCTGA ACGCGATCAC CACCGTCGCC
AAGGTGATTC CTCTGCTGGT GTTCATCCTG TTAGCGCTCG CAGCGTTCAG AAGCCATGTT
TTTGCCCAGG ACTTCTGGGG CAGCTCAAAA CTCGGCAACG TATTCACGCA GGTCAAAAGC
ACGATGTTGA TCACGGTCTG GGTGTTCATC GGCATCGAGG GCGCCAACGT GTTTTCGGCA
CGGGCGCAAC GCCGTCAGGA TATCGGGCGC GCAACGCTGC TCGGGTTTAC CGTCGTCTTG
CTGCTGCTGA TGGCGGTTTC TTTGCTGTCG CTCGGCATCG TCCCGCAAAG CGAACTGGCC
GCGATGAAGA ATCCGTCGAT GGCCGGCGTG CTCGACAAAG CCGTCGGCAC GTGGGGCGCC
GTATTGATCA GCATCGGCTT GCTGGTGTCG GTGGGTGGCG CGTTGCTGGC CTGGACGCTG
CTGGCGGCGG AAACGCTTTT CACGCCGGCG AGCGGCGGTG TGATGCCAAC GTTTCTCGCC
CGGCAAAACA GCCACGGCGT GCCGGCCAAC GCGCTCTGGC TGACCAATGG CCTCGTCCAG
CTCTTCCTGA TCATCACACT GGTGTCCAAC GCGACCTATC AGGCGCTGAT CTCGCTCGCG
ACTTCGATGA TCCTGATCCC CTATCTGTTC TCCGCAGTGT ACGCAACCCG GATCGCGATG
CGCGGCGACG GCTACACGAT AACGGACACA ACACGCAGCC GCGACACGCT GATCGGCGCA
ATGGCGACCG TCTATTGCTG TTGGCTGCTC TATGCAGCCG GCCCGAAGTA TCTGTTGCTT
TCGGCCCTGC TCTACGCGCC GGGCGTGCTT CTGTTCGGCT GGGCGAAACG CGAGCGCGGC
GCCAGTCTTT TCAAGCCCTT TGAAGTCGCC ATCCTGGCCG CCCTGATCGC TCTTGCGGCG
CTTGCGGCGT GGCTGCTGTC GAGCGGCGCG CTGGGCCTGT AA
 
Protein sequence
MKNLADSLTG ASVPRPAAQT AAQTAKPLRL GLLTALVIGS MIGSGVFSLP QNMASGAGAA 
AVLIGWLITG VGMLTLAFVY QTLSTRKPEL DNGIYAYARA SAGDFVGFNS AWGYWVSAWI
GNVGYLVIVF GTLGYFFPVF GDGNTRAAVL GASIVLWIMH AVILRGVRSA AVLNAITTVA
KVIPLLVFIL LALAAFRSHV FAQDFWGSSK LGNVFTQVKS TMLITVWVFI GIEGANVFSA
RAQRRQDIGR ATLLGFTVVL LLLMAVSLLS LGIVPQSELA AMKNPSMAGV LDKAVGTWGA
VLISIGLLVS VGGALLAWTL LAAETLFTPA SGGVMPTFLA RQNSHGVPAN ALWLTNGLVQ
LFLIITLVSN ATYQALISLA TSMILIPYLF SAVYATRIAM RGDGYTITDT TRSRDTLIGA
MATVYCCWLL YAAGPKYLLL SALLYAPGVL LFGWAKRERG ASLFKPFEVA ILAALIALAA
LAAWLLSSGA LGL