| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5549 |
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| Symbol | |
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| ID | 6278867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1756016 |
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| End bp | 1757128 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642616630 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001889273 |
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| Protein GI | 187920242 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.441753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.532681 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGG ACAGCCCCGA CTGGAGCACC TCGCGGAACC TGAGCGATAT CGATATCGAG
CATCGTTACC GGCTGCTTAT TGAGGCGGTG CAGGATTACG CGATCTTCAT GCTCGACGCA
GCAGGCAATG TCGCGAGCTG GAATCTCGGG GCGCAGCGAA TCAAAGGTTA TTCTCCAGAC
GAAATTGTCG GTCGCCATTT TTCCCGGTTC TATACCGACG AGGACATCGC GGCTGGCAAG
CCAGCGCAAT TGCTCGCCAC AGCCGCATGG CAGGGGCGCG TCGAAGACGA AGGCTGGCGC
GTGCGCAAGG ACGAAAGCCG GCTATGGGCG AACGTGGTGA TTACGGCGGT TCATGATGAA
CAGGGCGACT TGCTGGGATT CGCGAAGATC ACCCGCGATA TGACAGAGCG GCGCCGGCTG
GAGGACCTCG AGCACGCAAG TGCCGCGTCG GCACTCGTGC AGCAGGCACG TGAGAACGAG
CAGAGGCGCA TCGCGCGCGA ATTGCATGAC GACCTGGGGC AGCAGATCAC TGCGCTCAAG
ATGACACTAG CGCTTCACGA AACGGAACTG GCGCGGCATT TTTCTGAAGC GGGTCGCGCG
CGACTGGGTT CAGTCCGCGA GATGGCCGAC CAACTTGACG CGATGGCCAC ATCAATGCGG
CGCATTGCAG CTGATCTTCG CCCTCCCATG CTTGACGACC TGGGACTTGA AGCTGCGCTC
GAATGGATGA CCGAAGGCTT TGAGCAGCGT TACGGCGTGC CCGTTCGATG CGAGATTAGC
CCCGACGTGC TATGCCTGAA CGATTTGGCC GCCATTTCGC TGTATCGCGT GATTCAGGAG
GCGCTGACGA ATGTCGCGCG CCACGCTCGG GCGAACGAGG TATTCGTTAC GTTGTCAGCC
GATGACCGGC ACTATCACCT GCAGATTCAC GACGACGGTG TGGGGCTGCC AAAAGCCCCT
GCGCCACGAG CCGATTGCTT CGGTCTGCTC GGCATGCGCG AGCGGATCAG TCAGCTGGGC
GGTGTTCTTT CTGTCGACAG TATTCCTGGC CGCGGCGTCA CCATTACGGC ACGGGTGCCG
TTGGCGCGCG TTCTGGTGGA AAGCCAGCCG TGA
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| Protein sequence | MQQDSPDWST SRNLSDIDIE HRYRLLIEAV QDYAIFMLDA AGNVASWNLG AQRIKGYSPD
EIVGRHFSRF YTDEDIAAGK PAQLLATAAW QGRVEDEGWR VRKDESRLWA NVVITAVHDE
QGDLLGFAKI TRDMTERRRL EDLEHASAAS ALVQQARENE QRRIARELHD DLGQQITALK
MTLALHETEL ARHFSEAGRA RLGSVREMAD QLDAMATSMR RIAADLRPPM LDDLGLEAAL
EWMTEGFEQR YGVPVRCEIS PDVLCLNDLA AISLYRVIQE ALTNVARHAR ANEVFVTLSA
DDRHYHLQIH DDGVGLPKAP APRADCFGLL GMRERISQLG GVLSVDSIPG RGVTITARVP
LARVLVESQP
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