| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5538 |
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| Symbol | |
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| ID | 6280176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1746744 |
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| End bp | 1747760 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642616620 |
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| Product | putative transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_001889263 |
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| Protein GI | 187920232 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.13336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTCG ACTGGCACGC GCTGTATGAC GACGTGAAGC GGTTCGGCGA CTTCGGGAGC
GATGCCCAAC TGGCCGAGTA CCTCGGTTTG ACGCGCGCCC AGATATCGGC GTGGCGCACT
GGCAAAAGCG ATCTGGGAAC GCTGCCCAAA CTGAAGATTC TGGACGCTCT GGGGCATGAC
TCGCTCCGGC CGGCGATTCT GAGTTTGCTG CCCGAACAGA ACAGAGCGGA ACTCGAACGT
CTGCACATCA GTCTGGCTGA GCGAGTGTCC CGCGGCATGC GAGCGAGGGT TGGCGCCCAT
AACGAGGCTG AAAGCAATCG GCCGGTGCAG GGAGGGAACC GGTTGCTGAC CGGCGCGAGT
GGTGAAGAGT GGGCACGCAT CGAGGCGCAT CTGACGCCGG TTTCCATGCT GGCGGGAAAG
GTGTTGTATG AGCCGGGCGA TCCCCTCACG CTTCTGTATC TCCCCACTAC AGCGGTGATT
TGCACGACGC GTGCAACCAA CGGCGGCGGT CACGCGGAGA CCGCGATGAT CGGCCGGGAG
GGTTTGCTTG GCGTACCGGT GCTCGTAGGC GCGGATACCG CGGCATGCCA TGCGGTGGTG
CAAAGCGGCG GTGTGGCCTA TCGGATGAGC GCTGAGTTTG CGGTGGAAGA ACTGGCACGA
GGCGGTTACA TCCGGTCCGT CTTCTTTCGT TATGCGCAGG TGATGATCGC GCAAATGGCG
CAGACAGCCT TGTGCAACCG GCATCATTCG GTTAGCCAGC GTTTTTGCCG CTGGTTGCTC
ATGACCCTCG ACCGTGTTGA TATGAGCGAA TTCGAGGTCA CGCAGGCGTT GATCGCGCGG
ATGATTGGCG TGCGCACCGC GAAGCTCGCG GAGGTTGCGA GGCAGGTCGA AAGTACGGGC
GCGATCCGTT ACGGTAAAGG GCGAATTCAG GTAGTCGACC GCGCCGCGCT GGAGCGCGAG
GTCTGCGGGT GTTACGCCGT GATCCGGAAC GAGTCCGAAC ATCTGTTCCG ATTCTGA
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| Protein sequence | MTFDWHALYD DVKRFGDFGS DAQLAEYLGL TRAQISAWRT GKSDLGTLPK LKILDALGHD
SLRPAILSLL PEQNRAELER LHISLAERVS RGMRARVGAH NEAESNRPVQ GGNRLLTGAS
GEEWARIEAH LTPVSMLAGK VLYEPGDPLT LLYLPTTAVI CTTRATNGGG HAETAMIGRE
GLLGVPVLVG ADTAACHAVV QSGGVAYRMS AEFAVEELAR GGYIRSVFFR YAQVMIAQMA
QTALCNRHHS VSQRFCRWLL MTLDRVDMSE FEVTQALIAR MIGVRTAKLA EVARQVESTG
AIRYGKGRIQ VVDRAALERE VCGCYAVIRN ESEHLFRF
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