| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5530 |
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| Symbol | |
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| ID | 6280082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1737626 |
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| End bp | 1739257 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616612 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_001889255 |
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| Protein GI | 187920224 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.214437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.30089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACA ACCTCAACGC AGCCAGTCCG CGGCACACCG ATCCGGAGAA CCGCTTGAGC
CAGCCCCCTT CAGCGCCCGC CGCGGCGCCG CCCGCACCAC CGCCGCCGCT GAAGGGCGGC
CAGCTGGTGC TCGCCACGAT TGCCGTCGCG CTCGCCACCT TCATGAATGT GCTGGACACG
TCGATCGCGA ACGTTGCGAT TCCAACCATT TCGGGCAACC TCGGCGTCTC GGTGGATGAA
GGCACGTGGG TCATCACCGT GTTCGCCGCG GCCAACGCCG TGTCGATCCC GCTCACCGGC
TGGCTCACGC AACGCATCGG CCAGGTGAAG CTGTTCGTCG GCGCGATCCT GATGTTCGTG
CTGGCGTCTT GGTTGTGCGG CATTGCGCCG ACGCTGCCGA TCCTGCTGCT CGCACGGGTT
TTCCAGGGCG CCGTGGCCGG CCCGCTGATT CCGCTGTCGC AAGCCATTCT GCTCGGCTCG
TATCCGAAGG AGAAATCCTC GACCGCGCTT TCCTTATGGG CGATGACCGC GACCGTCGGC
CCGATCGCGG GCCCGGCGCT AGGCGGCTGG ATCACGGATA GTTACAGCTG GTCATGGATC
TTCTACATCA ACATTCCGGT CGGCATTTTC GCGGCCGGCG TCACGTGGAT GATCTATCGC
ACCCGCGAGT CGCCGACCCG CAAACCGCCC ATCGACATGG TCGGACTCGG TCTGCTGATC
ACGTGGGTCG CCTCGCTGCA GATCATGCTG GACAAGGGCA AGGATCTCGA CTGGTTTTCG
TCGCCGGTGA TCGTGATTCT CGGCATCACC GCGCTCATCA GCTTCGCGTT CTTCCTCGTG
TGGGAATTGA CCGAGGACAA TCCGATCGTC GATTTGCGGC TGTTTCAGCA GCGCAATTTT
CTCGGCGGCA CGATTGCGAT TTCGGTCGCG TATGGCGTGT TCTTCGGCAA TCTCGTGCTG
CTGCCGCAAT GGATGCAGGA GTATCTGAAT TACCGTTCCG TCGACGCCGG TCTCGTCACC
GCCCCGCTCG GCATATTCGC GGTGATCCTC GCGCCGGTAA TGGGCCGCGT GCTGCCGCGC
TCGGACGCGC GCGTGATCGC CACGATGGCG TTTATCGGCT TCGCGATCGT GTTTTACATG
CGCTCGAAGT ATGTGATCGA GATCGACACG TGGCATCTGG TCCTGCCGAC GCTGCTGCAA
GGCATTCCGA TGGCGCTGTT CTTCGTGCCG CTGACCGCGA TCATCCTGTC CGGCCAGCCG
CCAGGCAAGA TTCCCGCGGC GGCGGGTCTG TCCAATTTCG CCCGCGTATT TTGCGGCGCG
GTGGGCACCT CGGTCGCCGG CAACGAATGG AACAACCGCA CCGTGCTGCA TCACGCGCGG
CTCACCGAGC AGGCCTCCAT CAATAACCCG ACGTTCAATC AGCAGATCGA TTCGACCCAG
TCGCTGCTGC ATATGAATCC GCAATCGGCC CATGCGTTGT TCGATTTCAC CGTCAACACG
CAGGCGGCCA TGATGGGCCT GAACGATATC TTCTTCATCT CGGCGGTCAT CTTCATTCTG
ATCATTCCGC TGATCTGGAT CACGCGGCCG GCCAAGGGCG GCGGCGGCCC GGACGCGGCC
GGCGCGCACT GA
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| Protein sequence | MKYNLNAASP RHTDPENRLS QPPSAPAAAP PAPPPPLKGG QLVLATIAVA LATFMNVLDT
SIANVAIPTI SGNLGVSVDE GTWVITVFAA ANAVSIPLTG WLTQRIGQVK LFVGAILMFV
LASWLCGIAP TLPILLLARV FQGAVAGPLI PLSQAILLGS YPKEKSSTAL SLWAMTATVG
PIAGPALGGW ITDSYSWSWI FYINIPVGIF AAGVTWMIYR TRESPTRKPP IDMVGLGLLI
TWVASLQIML DKGKDLDWFS SPVIVILGIT ALISFAFFLV WELTEDNPIV DLRLFQQRNF
LGGTIAISVA YGVFFGNLVL LPQWMQEYLN YRSVDAGLVT APLGIFAVIL APVMGRVLPR
SDARVIATMA FIGFAIVFYM RSKYVIEIDT WHLVLPTLLQ GIPMALFFVP LTAIILSGQP
PGKIPAAAGL SNFARVFCGA VGTSVAGNEW NNRTVLHHAR LTEQASINNP TFNQQIDSTQ
SLLHMNPQSA HALFDFTVNT QAAMMGLNDI FFISAVIFIL IIPLIWITRP AKGGGGPDAA
GAH
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