| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5524 |
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| Symbol | |
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| ID | 6280343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1729677 |
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| End bp | 1731950 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642616606 |
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| Product | Amylo-alpha-16-glucosidase |
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| Protein accession | YP_001889249 |
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| Protein GI | 187920218 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.735015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGC CAGAAGCCCT CGGCGGCCTT TCGGGCGGAA TCGATCACCG CGAACCCGAG
CCGGACGGCG CATTCATCCC GACAGAAAAC CTCAATGTGG CGAGCGCCAC TCAGCATGTG
CTGAAGTCGG GCGACACCTT CATTGTCAAC GATCCGCTTG GCGATATTAC CGGCCACGAC
GACGGCCTGT TCGTCAACGA CACCCGGGTT CTCTCGCAAC TGCGCCTCAC TTTCGGCGGA
CGCGCGCCGT CGCTGTTATC AGGCAGCGTC AGCAGCGACA ATACGTCGTT CACCGCGCAT
CTGACCAATC GTCCGTTGCC GCCGCTCGGC GGTGACAGCA CGCCCGAGGG CGTGATCCAC
GTCGAGCGCG TGCGGGTGCT GTCGGGCACC GTGCTCAACG AAGCCATCGA ACTCACCAAC
TACGGCACGA GCGACGCCGT GGTGCCGTTG TCCATCTCGT TCGCCAGCGA CTTTCGCGAC
ATGTTCGAAG TGCGCGGCCT GAAGCGCGAA AAGCAGGGCC GCGTCGAACC GGCGCGCGTC
GAGAATCGGG AAGTGCTGCT CGGCTACGTG GGCCTCGACG ACGTGGCGCG CAATGTGCGG
ATCGCTTTCT CGCCCGAACC GGACAAACTG TTCGCCGACC GCGCCGATTA CACCGTCAAG
CTGCCGGCTC AGGCGTGTGT GTCGATCTAT CTGTCGGTGT CGGTGCAGGT CGTGGCGCAG
ACCGACAAGC CGATTGCCGG CGTCTCGCAG CCCACGCATG CATTGAGCGA AGCGCACCTG
TCGCAGATCG ACGCCGAGCG TCCGCGTGTC GGCCGCGCGG CTGTGCGCGC CGCGCTCGTC
GACGCCCACC TCGTGATGCG CGAGCGCCGC CGCGTCACCG CGCGCGTGCG TTCGAGCAAT
CCGCTGTTCA ATGCGTGGAT CGACCGCTCG CTCGCCGACC TTGGCCTCCT GACCACGGAC
CTCGTGACCG GTCCGTATCC GTATGCCGGC ATTCCGTGGT TCTCCACGCC GTTCGGCCGC
GATGCGGTCA TCACGTCGCT TCAGACGCTT TGGCTGCAGC CGCAATTGGC CGCGGGCGTA
TTGCGCTTTC TCGCCGAACA TCAGGCGCGC GAGAACTCGC CGTTTCGCGA TGCCGCGCCC
GGCAAGATCA TGCACGAGAT GCGCAAGGGC GAGATGGCCG CCACCGGCGA AGTGCCGTTC
GCGCTGTACT ACGGCGGCGT CGACACCACG CCGTTGTTCA TCGTGCTGGC TGGCGCCTAT
GCGGCACGCA CATCCGACCT GGCATTGATC GACGAATTGT GGCCGGCGCT GGAGCGCGCG
GCGCAGTGGG TCGCGGGCGT GTGCGACAAG AACCGTTACG GCCTGCTGGA CTATCAGCGC
GAATCGGACG GCGGTCTCGC GAATCAAGGC TGGAAGGACA GCCACGACTC TGTCTTCCAC
GCCGACGGCC GCTTCCCCGA CGGCCCGATT GCGCTCGTCG AAGTGCAGGC CTACGCGAGC
GCCGCCTTCG ACACCATGGC GCACTTCGCG AAGCTGCGCG GCCTGCATGA CGCGGCGGAG
CAATACAGCG AGCGGGCGAA GAAAATCCGC CAGTGCGTCG AAGAAAAGTA CTGGATGGAG
GAGGCCGGTT TCTACGGCAT CGCGCTCGAC GGACACGGCG ACCTGTGCCG CGTGATGGCC
TCGAACGCGG GACACTTGCT GGCCTTCGGT CTGCCTTCGC GCGAGCGTGG CGAATCGGTG
GTGCGCGCGC TCGACTCCAC GCTGTTCCAC ACCGGCTGGG GTGTGCGCAC GCTGGCCGCG
AGCCAGTCGC GTTTCAACCC GATGGCGTAC CACAACGGCT CAGTCTGGCC GCACGACAAC
GCGCTCTGCG CGCGCGGCCT GTCGCGCTAC GGCGGCAAGG CAGCGGCGGT GCGTCTGTTG
CAGGCGCTGT TTCAGGCGGC GGTCAACTTC GACATGCGCT TGCCTGAACT CTTCTGCGGC
TTTCCACGGC GGCGCGGCGA GCCGCCCACC GCGTATCCGG TCGCCTGTCT GCCGCAGGCA
TGGGCAGCGG GCTCGCCATT CATGATGCTC GAAGCGTGTC TGGGCATCAC GATCGACGCC
GAGCGGCGCG AAGTGCTGAT CGAGCAGCCG ATGCTGCCCG AAGGCATCGA CTGGCTCGAA
GTGGGCGACC TGCGGGTGGG CGATGCCTCG GTGTCGATCA CGTTCCGCCG CATCGGCGAT
AAGGTCGTGG CCTCGGCGGA GCAGGGCGAC GTGCGGGTGA TCGCGCTTCT TTGA
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| Protein sequence | MQQPEALGGL SGGIDHREPE PDGAFIPTEN LNVASATQHV LKSGDTFIVN DPLGDITGHD
DGLFVNDTRV LSQLRLTFGG RAPSLLSGSV SSDNTSFTAH LTNRPLPPLG GDSTPEGVIH
VERVRVLSGT VLNEAIELTN YGTSDAVVPL SISFASDFRD MFEVRGLKRE KQGRVEPARV
ENREVLLGYV GLDDVARNVR IAFSPEPDKL FADRADYTVK LPAQACVSIY LSVSVQVVAQ
TDKPIAGVSQ PTHALSEAHL SQIDAERPRV GRAAVRAALV DAHLVMRERR RVTARVRSSN
PLFNAWIDRS LADLGLLTTD LVTGPYPYAG IPWFSTPFGR DAVITSLQTL WLQPQLAAGV
LRFLAEHQAR ENSPFRDAAP GKIMHEMRKG EMAATGEVPF ALYYGGVDTT PLFIVLAGAY
AARTSDLALI DELWPALERA AQWVAGVCDK NRYGLLDYQR ESDGGLANQG WKDSHDSVFH
ADGRFPDGPI ALVEVQAYAS AAFDTMAHFA KLRGLHDAAE QYSERAKKIR QCVEEKYWME
EAGFYGIALD GHGDLCRVMA SNAGHLLAFG LPSRERGESV VRALDSTLFH TGWGVRTLAA
SQSRFNPMAY HNGSVWPHDN ALCARGLSRY GGKAAAVRLL QALFQAAVNF DMRLPELFCG
FPRRRGEPPT AYPVACLPQA WAAGSPFMML EACLGITIDA ERREVLIEQP MLPEGIDWLE
VGDLRVGDAS VSITFRRIGD KVVASAEQGD VRVIALL
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