Gene Bphyt_5480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5480 
Symbol 
ID6278833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1686022 
End bp1686363 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content57% 
IMG OID642616565 
Productprotein of unknown function DUF718 
Protein accessionYP_001889208 
Protein GI187920177 
COG category[S] Function unknown 
COG ID[COG3254] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.299938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.858981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTACT GCTTCGCACT GGATCTGAAG GACGACCAGG CGCTTATCGA GAGTTACGAA 
AAATATCACC GCGACGTCTG GCCTGAAGTG CTGCAGCATC TGCGCGAGCA TGGCGTGGTG
GGTATGGAGA TTTTCCGACT TGGAACCCGC CTGACGATGG TCATGGAGAC GGACGACGTC
ACGTTTGACG GCGACAAGAT GGCCCGAGCC GCCGAATCGA ACCCGGTGAT TCGTGATTGG
GAGGATTTGA TGTGGAAATT CCAGGCGCCC ACGCCGTGGA CGCCAGCGGG CGAGAAGTGG
GTTTCGATGC GCCAGATATT TGACCTACGC AAACAGCCGT AA
 
Protein sequence
MRYCFALDLK DDQALIESYE KYHRDVWPEV LQHLREHGVV GMEIFRLGTR LTMVMETDDV 
TFDGDKMARA AESNPVIRDW EDLMWKFQAP TPWTPAGEKW VSMRQIFDLR KQP