| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5462 |
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| Symbol | |
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| ID | 6278561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1667068 |
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| End bp | 1668654 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642616547 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001889190 |
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| Protein GI | 187920159 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.432135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCG AAGCGATCAA GTCCGCTCCG GCGGCAAGCG TTGGAGCTCA AGGCGCCGCC
GCCTCAGCGG TGATCTGTCC TGGCTCTGCG GCCGCGAATC TGGCGACGGG CGTCGCAATG
GGCGTCGCAA AGGGCCATGC CAAGGGCGCG GCACCATCGG CCGACAACGC TCGCCCGCGC
TTCGAACGGC AAGGGCTTGC GCTGGCGGTG CTGTTCGTCG GCGCCTTCCT TGCGCCGCTC
GACTACTTCA TCGTCAATCT CGCGCTGCCC TCGATCCACA CCGGCCTGAA CGCCACCGAC
GCACAATTGC AACTCGTGGT CTCCGCCTAT GCGTCGGCGT ACGCGGTTCT GCTGATCACG
GGTGGGCGGC TCGGCGATCT GTTCGGCCGC CGCCGCATGT TCATGACGGG CATGGCGGCG
TTCGTGGTCG CCTCGGCGCT GTGCGGCTTC GCGACCAGTG GGCACATGCT GGTGATCTCG
CGGATCGTGC AGGGCATCGC GGCCGCCGTC ATGGCGCCGC AAGTGCTCGC CACGATTCGC
GCCGTGGTGC CGCTGCATCA GCAGACCAAG GTGATGAGCC TGTATGGTTT CGTGTTCGGC
TTGTCGTCGA TCGTTGGGCA GTTGGGCGGC GGCGCGCTGA TCACGTATCA CCCGTTCGGA
CTCGACTGGC GCATCATCTT TCTGATCAAC ATTCCGATCG GCATCGCGGC GTTTGTCGGC
ACGTGGAAGT TCGTGCCGGA AAATCAGCCG GCCACGCGAA CCGGCATCGA CGTGAAGGGC
GTGGCGCTGC TGTCCGCCGT GCTGCTGCTG GTCATCTACC CGATGACGCA CGGCCGCGAG
GCCGGCTGGC CGGCGTGGAC CTTCGTGATG TTCGCGCTTG CCGTGCCGGC GTTCGCGCTC
TTCGTGACGA CCGAGCAACG CGTGGAGCGC GGCGGCGGCC ATCCGCTCGT GGACCTGCAA
TTGTTCCGCA ACCGGGCCTT CGCGCTGGGT CTCGTGCTCG CGTTCCTGTT TTACTGCAAT
AGCGCGTTTT TCCTGACCTA CGGGATCTTC CTGCAAACCG GTCTGCACTG GACACCGCTC
GCCTCGGGCA TGGCGATCAT GCCGTTCGCG ATCGGTTTCG TCGTCGGGCC GCTGACCTCG
CCGGCGGTGG TCAAGCGCAT CGGCGGCCAT GTGCTCACGC TCGGTTTTTC GATGATGACG
GTCGGCTTCA CGGTCACGGG TTGGTCCGCC ACGCAGTCGG CCACGCCGGA TCTGCTGTTC
TATTGCGGAC TGGTGTGCGC CGGCGTCGGT CACGGCCTGC TGCTGCCGTC GATCATGCGC
ATCGTGTTGC TCGAGGTCGT GCCGGAGAAA GCCGGGCTTG CTTCCGGCGT GGTGTCGTCG
ACGCTGCAGA TCGGCTCGGC GTTCGGCACG GCCGCCATCA GCGGTGCGTT CTTCGGCGCA
ATCGGCGCTC GCGCGACGTC GGGCGACTAC GCGCACGCGT TCCAGATCAG CCTCGCGATC
AACGCAGCCC TGATGTTCGT ATGCATTGGC TTGAGTGTGC TGCTCGTGCG GCACCAGCAA
CTCCAGGCTG TCGCCCGCGC TCAATAG
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| Protein sequence | MKSEAIKSAP AASVGAQGAA ASAVICPGSA AANLATGVAM GVAKGHAKGA APSADNARPR
FERQGLALAV LFVGAFLAPL DYFIVNLALP SIHTGLNATD AQLQLVVSAY ASAYAVLLIT
GGRLGDLFGR RRMFMTGMAA FVVASALCGF ATSGHMLVIS RIVQGIAAAV MAPQVLATIR
AVVPLHQQTK VMSLYGFVFG LSSIVGQLGG GALITYHPFG LDWRIIFLIN IPIGIAAFVG
TWKFVPENQP ATRTGIDVKG VALLSAVLLL VIYPMTHGRE AGWPAWTFVM FALAVPAFAL
FVTTEQRVER GGGHPLVDLQ LFRNRAFALG LVLAFLFYCN SAFFLTYGIF LQTGLHWTPL
ASGMAIMPFA IGFVVGPLTS PAVVKRIGGH VLTLGFSMMT VGFTVTGWSA TQSATPDLLF
YCGLVCAGVG HGLLLPSIMR IVLLEVVPEK AGLASGVVSS TLQIGSAFGT AAISGAFFGA
IGARATSGDY AHAFQISLAI NAALMFVCIG LSVLLVRHQQ LQAVARAQ
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