| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5411 |
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| Symbol | |
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| ID | 6278427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1603591 |
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| End bp | 1605156 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642616496 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001889139 |
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| Protein GI | 187920108 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.423231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCTC CTTCCCCACA TCAGCGCCCA ACAACCGTCA ATCCCGCATT CGTGCTGGCC
ACCGCCTCGG CCACTTGCGC GCTGATCGTG CTGGACACCA ATGTCGTGGC GGTCTCGCTG
CCGTCGATCG CGCGCTCGTT CCACGCGAGT TTCGCCGACG TCGAATGGGT CGTCAGCGCG
TACATGGTCG CGTTCGCGTC GTGCCTGCTG CCCGCGGGCG GTCTCGCCGA CCGCGTCGGT
CGCAAGAAAA TGCTGCTGCT CGGGCTCGCG GTGTTCTTTC TGGCGTCGCT CGGTTGCGGC
GCGGCGCCCA CGGCGGCGGC GCTGAACATC GCGCGGGCGG TCAAGGGCGT CGGCGCCGCG
ATGCTGCTCA CCGCCGCGCT CGCCGTGATC GCCAATACGT TCCACGAAGG CCCCGCCCGG
GTGCGCGCGT GGGCTGTGTG GGGCACCTGC ATGGGCCTCG CCACCACGGT GGCGCCGCTG
GTCGGCGGCG TCATCACGCA ATGGTTCGGT TGGCGCTGGA TCTTTCTGCT GAATCTGCCG
GTGTGCGCGG TGCTCGCGTG GTGCGCGTCG CGCGCGATCG TCGAGTCGCG CAATCCGAAA
CCCGGTCCGC TCGATCTCGC CGGCAGCGTG CTGTTCGGCA GCGCGCTCGC GCTCGGCATC
TGGGCGTTGA TCGAAGTACC GGCCGACGGC CTTGCGGGCT GGCCGACCGT CGCGCGGCTC
CTTGCCTGCG TGCTGTTGTT CGCCGCCTTC GTTCAGGTGC AACGAGTACG CGCACATGCA
ATGGTCGATC TCGCGCTGTT CCGGCAACCA CGCTTTGTCG CCGCCGTGCT TGCCATGTTC
GGCTACGCCG CCTGCGCGCA AGTAATGATG ACGTTCCTGC CGCTGTATCT GCAGAACGCG
TTCGGTCTGT CGGCGGTGGC GGCGGGCGTC GGCATGTTGC CGTTCGCGCT GTCGATGGTG
GTCGGGCCGT ATATCGGCGC CGCGCTCGGC AGGCGTGTGT CGAGCATGGC GGTGCTGTCG
GCGGGCCTGG TGCTGATCGC CCTCGGCAAT CTGCTGACGG CATGGGTTGC GGGCGACGAA
CGCTATGCGC TGGTCGCGCT CGGCATGATC GTGACGGGAC TCGGCGCCGG CATTCTGAAC
GGCGACACGC AGAAGGCGAT CATGGCCTGC GTGCCGCCGG ATCGCACCGG CATGGCCTCC
GGCATCAGCA CGACGACGCG CTTCACCGCC ATTGTCACCT CGGTCGGGGT GCTCGGTGCG
GTGCTGGCGG CGCGCACGCA CGAGGCATTT CTCGCGGCGA CGCCAGTGAC GCCCGAGGTG
AAAACCGCGT TCGATTCAGG CTTCATGTCT CGCGTGCTGG CCGGCGATAC GGCGCAGGCC
ACCGCTGGTT TGCCGGCCGC CGTACGCGCC ACGCTGATGT CGGCCGCGCA CGCGAGCTTT
GCAAGTGGTT TTGCCGCCGC TCTGGGTCTG GCCGCTGTCA TTGCGGTGTC GATTGCGGTG
GGCGTGTGGT TGCTGGCCGG CAAAAGCGAG GCCGCGCGGA TGCGTGGCGC GGCGTCGAAC
GGCTAG
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| Protein sequence | MPPPSPHQRP TTVNPAFVLA TASATCALIV LDTNVVAVSL PSIARSFHAS FADVEWVVSA
YMVAFASCLL PAGGLADRVG RKKMLLLGLA VFFLASLGCG AAPTAAALNI ARAVKGVGAA
MLLTAALAVI ANTFHEGPAR VRAWAVWGTC MGLATTVAPL VGGVITQWFG WRWIFLLNLP
VCAVLAWCAS RAIVESRNPK PGPLDLAGSV LFGSALALGI WALIEVPADG LAGWPTVARL
LACVLLFAAF VQVQRVRAHA MVDLALFRQP RFVAAVLAMF GYAACAQVMM TFLPLYLQNA
FGLSAVAAGV GMLPFALSMV VGPYIGAALG RRVSSMAVLS AGLVLIALGN LLTAWVAGDE
RYALVALGMI VTGLGAGILN GDTQKAIMAC VPPDRTGMAS GISTTTRFTA IVTSVGVLGA
VLAARTHEAF LAATPVTPEV KTAFDSGFMS RVLAGDTAQA TAGLPAAVRA TLMSAAHASF
ASGFAAALGL AAVIAVSIAV GVWLLAGKSE AARMRGAASN G
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