| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5406 |
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| Symbol | |
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| ID | 6277989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1599116 |
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| End bp | 1600555 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642616491 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001889134 |
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| Protein GI | 187920103 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.166846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.395766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCA GCGAGACACG CAACGCGCAC GTCGGCTGGC TGCCGTATAT CGTCGCGGCC
ACCTTCTTCA TGGAATACCT CGACACCACG GTGATCGCCA CCGCGTTGCC GCAGATGGCG
CACTCGTTCG GCGTCGGTCC CAACAGCCTC AGTCTCGGCA TGACGGCCTA CATGCTGGCG
CTGGCGATCT TCATCCCGGC GAGCGGCTGG GTCGCCGACC GCTGCGGCTC GCGCACGGTG
TTCTTCAGCG CGATCGGCGT GTTCACCGTG GCTTCCGTGC TGTGCGGCCT GTCGCAGAAC
GTCGCCGAGT TCACCGCAGC CCGTCTGCTG CAAGGCATAG GCGGCGCGAT GATGGTGCCG
GTGGGCCGGC TGATCGTGGT CCGCAGCACC GAAAAAAGCC GCATGATGCA GGCGATCTCG
ACCATCACGT GGCCGGCGAT TGCCGCGCCG GTGGTCGGGC CGCCTATCGG CGGCTTCATT
ACGACTTACG CGTCGTGGCG CTGGATCTTT CTGCTCAACG TGCCGTTCGG CCTCGCGGCC
ATGGCTGTTG CGCTCGCGCT GGTGCCGAAC CTGCGCGGCG CCGAACGCAA GCCGCTCGAC
GTAATCGGCC TGCTGCTGAG CGGCGTAGCG TTGACGGCGA TTCTCTACGG CGCGGAGTTG
GCAAGCCAGC CCGGCGAGAA TCCGTGGATC GCCGGGGCGA TCGTCCTCGG CGGTTTGCTG
GTAGGCGTGG TGGCGTTCCA GCATGCGAAG CGTCATCAGC ACCCGCTCAT CGACGTCTCG
ACGCTGAAAA TCCCCACTTT TTCCGTGACC GTGGTGACGG GCTCGTTCAC GCGCATCGGC
ATCGGCGCGG TGCCTTATCT GATGCCGCTG CTGTTTCAGG TGGGCTTCGG CTTGTCGGCG
TTCAAGTCGG GGCTGTTGCT GCTCGCGAGC GCGCTCGGCA ACCTCGGCAT GAAGGCGCTG
ACCACTCGCA TCCTGCAGCG TTACGGTTTT CGCATGGTGT CGATCGTCGA CGTGACGGTG
GCCGGCGTGT TCATTATCGC GTGCGGATTG CTCAGCCCGA ACGTGCCGCT CGCGCTGGTG
CTGTTCGTCG TGTTCATCTA CGGCGTGGCG CGTTCGATGC AATTTTCGAC GCTCGCCACG
CTCGCTTACG CCGACGTCGC GCAACCGCAG ATGAGCGCGG CCAGCACGCT ATGGAGCGCG
GCCGCGCAGA TGACGATCGG CCTCGGCATC GCGTTCGGCG CGGTGTCGCT GCGCGCGGCG
GCGTTCTTCA ACGGCGAGGT CACGGGCCGC GTGTTCACGC TCGACGATTT CCGTCTCGCG
TTTCTGTTCG CGGGCATAGT GACGCTGGCA TCCGTGATCG GCTACATGGG TCTCGCGCGC
GATGCCGGCC AGAGCATCGG CGGCGGTTCG CGCGGCAGCG AGGATCCGGC CAAGGGTTGA
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| Protein sequence | MSGSETRNAH VGWLPYIVAA TFFMEYLDTT VIATALPQMA HSFGVGPNSL SLGMTAYMLA
LAIFIPASGW VADRCGSRTV FFSAIGVFTV ASVLCGLSQN VAEFTAARLL QGIGGAMMVP
VGRLIVVRST EKSRMMQAIS TITWPAIAAP VVGPPIGGFI TTYASWRWIF LLNVPFGLAA
MAVALALVPN LRGAERKPLD VIGLLLSGVA LTAILYGAEL ASQPGENPWI AGAIVLGGLL
VGVVAFQHAK RHQHPLIDVS TLKIPTFSVT VVTGSFTRIG IGAVPYLMPL LFQVGFGLSA
FKSGLLLLAS ALGNLGMKAL TTRILQRYGF RMVSIVDVTV AGVFIIACGL LSPNVPLALV
LFVVFIYGVA RSMQFSTLAT LAYADVAQPQ MSAASTLWSA AAQMTIGLGI AFGAVSLRAA
AFFNGEVTGR VFTLDDFRLA FLFAGIVTLA SVIGYMGLAR DAGQSIGGGS RGSEDPAKG
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