Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5403 |
Symbol | |
ID | 6279642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1594808 |
End bp | 1595371 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642616488 |
Product | peroxiredoxin |
Protein accession | YP_001889131 |
Protein GI | 187920100 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | [TIGR03137] peroxiredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000123087 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.352797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATCA TCAACAGTCA AGTCAAACCG TTCAAGGCGC AGGCTTATCA CAATGGCGAT TTTCAGACCG TCACGGAAGA AAGCCTGAAG GGCAAGTGGT CGGTGTTCGT TTTCTACCCG GCTGACTTCA CCTTCGTGTG CCCGACCGAA CTGGGCGACC TGGCAGACCG TTACGACGAA TTCCAGAAGC TCGGCGTCGA AATCTACAGC GTGTCGACCG ATACGCACTT CACGCACAAG GCATGGCACG ACACGTCGGA TACGATCCAG AAGATCAAGT ACCCGATGAT CGCCGACCCG ACGCTGGCCA TCTCGCGCAA CTTCGACGTG CTGATCGAAG AAGAAGGCCT GGCACTGCGC GGCACGTTCG TGATCAACCC GGAAGGCGAA ATCAAGCTGG CCGAAATTCA CGACAACGGC ATTGGCCGTG ACGCCGGCGA ACTGCTGCGC AAGGTGCAAG CTGCGCAATA CATCGCGGCT CACCCGGGTG AAGTGTGCCC TGCCAAGTGG ACGCCGGGTG CAGAAACGCT GACCCCGTCG CTCGACCTGA TCGGCAAGAT CTAA
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Protein sequence | MPIINSQVKP FKAQAYHNGD FQTVTEESLK GKWSVFVFYP ADFTFVCPTE LGDLADRYDE FQKLGVEIYS VSTDTHFTHK AWHDTSDTIQ KIKYPMIADP TLAISRNFDV LIEEEGLALR GTFVINPEGE IKLAEIHDNG IGRDAGELLR KVQAAQYIAA HPGEVCPAKW TPGAETLTPS LDLIGKI
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