| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5397 |
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| Symbol | |
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| ID | 6279702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1588287 |
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| End bp | 1589303 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616482 |
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| Product | 1-aminocyclopropane-1-carboxylate deaminase |
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| Protein accession | YP_001889125 |
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| Protein GI | 187920094 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
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| TIGRFAM ID | [TIGR01274] 1-aminocyclopropane-1-carboxylate deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0993744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0379152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGC AACGATTCCC TCGTTACCCG CTGACCTTTG GGCCGACGCC GATCCAGCCG
CTCAAGCGCC TGAGCGACCA CCTCGGCGGC AAAGTGCATC TGTATGCGAA GCGCGAAGAC
TGCAACAGCG GCTTTGCGTT CGGCGGCAAC AAGACGCGCA AGCTCGAATA TCTGATCCCC
GAAGCGCTCG CGCAGGGTTG CGACACGCTC GTGTCGATCG GCGGAATCCA GTCGAACCAG
ACACGCCAGG TAGCGGCCGT GGCGGCGCAT CTGGGCATGA AGTGCGTACT GGTGCAGGAG
AACTGGGTGA ACTACTCGGA TGCGGTCTAC GACCGGGTCG GCAACATTCA GATGTCGCGC
ATTCTCGGCG CCGACGTGCG CCTCGTGGCC GATGGTTTCG ACATCGGCTT TCGCAAGAGC
TGGGAAGATG CGCTGGAAAG CGTGCGGGCG GCCGGCGGCA AGCCGTATGC GATTCCGGCT
GGCTGTTCCG ACCATCCGCT CGGCGGACTC GGTTTTGTCG GTTTCGCGGA GGAAGTTCGC
CAGCAGGAAG CGGAATTGGG CTTCAAGTTC GACTACATCG TCGTGTGTTC CGTGACCGGC
AGCACGCAGG CCGGCATGGT GGTGGGTTTC GCCGATGACG GCCGCGCCGA GCGTGTGATC
GGTATCGACG CGTCGGCCAA GCCCGCGCAG ACGCGCGAGC AGATCACCCG CATCGCGAAG
CAGACTGCGG AACAGGTCGG CCTGGGACGC GATATCACCA GCAAGGACGT GGTGCTCGAC
GAGCGCTTCG GTGGCCCGGA ATACGGTTTG CCGAATGACG GCACGCTCGA AGCGATCCGC
TTGTGCGCGC GCCTGGAAGG CGTGTTGACC GATCCTGTCT ACGAGGGCAA ATCGATGCAC
GGCATGATCG AGATGGTGCG CAACGGCGAG TTTCCCGAAG GTTCGCGTGT GCTGTATGCG
CACCTCGGCG GCGTGCCCGC GCTGAACGGC TACAGCTTCA TTTTCCGCAA CGGCTAA
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| Protein sequence | MNLQRFPRYP LTFGPTPIQP LKRLSDHLGG KVHLYAKRED CNSGFAFGGN KTRKLEYLIP
EALAQGCDTL VSIGGIQSNQ TRQVAAVAAH LGMKCVLVQE NWVNYSDAVY DRVGNIQMSR
ILGADVRLVA DGFDIGFRKS WEDALESVRA AGGKPYAIPA GCSDHPLGGL GFVGFAEEVR
QQEAELGFKF DYIVVCSVTG STQAGMVVGF ADDGRAERVI GIDASAKPAQ TREQITRIAK
QTAEQVGLGR DITSKDVVLD ERFGGPEYGL PNDGTLEAIR LCARLEGVLT DPVYEGKSMH
GMIEMVRNGE FPEGSRVLYA HLGGVPALNG YSFIFRNG
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