| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5345 |
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| Symbol | |
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| ID | 6279804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1528717 |
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| End bp | 1529457 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642616431 |
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| Product | LrgB family protein |
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| Protein accession | YP_001889074 |
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| Protein GI | 187920043 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.426431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCA TTCCGAAGCT CGGCGCGATC TGGGTGTATC TCGCCGCGAG TCCCTTGCTC
GGGTTGACGA TTACGCTGAT CGCCTACCTC ATTGCCCAGA CGATCTATGC GAAGGCGCGC
TTCAATCCGC TTGCCAATCC CGTGCTGATC GCGGTGGCGC TGCTGGTCCT GCTGCTCGAG
ATCACCGGCA CACCGTATGC GACGTACTTT GAAGGCGCGC AATTCGTTCA CTTTCTGCTG
GGCCCCGCGA CCGTGGCGCT CGCACTGCCG CTTTACCGGC AGTGGCCGAA GCTGCGCCGC
TCCGCGTTGC CGCTGATCGG CGGGCTGGTG GCGGGATCGT TGACGGCCAT CGTTTCGGCG
GTCGGCGTGG CGGCGCTGTT CGGCGCGTCG CATCAAACGC TTGCGTCGCT CGCACCCAAA
TCCGCGACCA CGCCGATCGC GATGGCGGTC GCTTCCGAGA TCGGCGGCAT TCCGTCCTTG
ACCGCCGTGC TCGTCATTTC GACCGGCGTA TTCGGCGCCG TGTTCGCGCG TACGATTCTC
AACGCGCTGC GCATCGCCGA ACCCGAGGTG CGCGGTTTCG CGCTGGGCAT TGCGTCACAT
GGCATCGGCA CAGCGCGCGC TTTTCAGGTG AGCGAGGAAA TGGGCGCGTT CGCCGGCCTC
GGCATGGGCC TGAACGGCGT GTTCACCGCG TTCGTCGTAC CGGTGTTGAT GCCGCTCGCG
GCGCGCTGGC TGACGGGCTG A
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| Protein sequence | MTAIPKLGAI WVYLAASPLL GLTITLIAYL IAQTIYAKAR FNPLANPVLI AVALLVLLLE
ITGTPYATYF EGAQFVHFLL GPATVALALP LYRQWPKLRR SALPLIGGLV AGSLTAIVSA
VGVAALFGAS HQTLASLAPK SATTPIAMAV ASEIGGIPSL TAVLVISTGV FGAVFARTIL
NALRIAEPEV RGFALGIASH GIGTARAFQV SEEMGAFAGL GMGLNGVFTA FVVPVLMPLA
ARWLTG
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