Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5336 |
Symbol | |
ID | 6279514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1517594 |
End bp | 1518208 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642616422 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
Protein accession | YP_001889065 |
Protein GI | 187920034 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAT CCATCACGCT GGTTCTGTTC GACATGGAAG GTGTTTTGTC CCACTACGAC CGCGCCGCGC GAGTCGATCA TCTGGCGGCA ACCGCCGGTT GCACAGCGGA CACGGTGCGT CACGCGATCT GGGGTTCGGG GCTCGAAGCG CGCGCCGACG CCGGGGAAAT CAGCGATGAC GAGTATCTGC GCGAGTTAGG CATGCTGCTG AACCACCCCA TCAGCCGCGA CGAATGGCTG GCCGCCCGTC ACGCGTCGAT TACGCCGAAC CAGGACGCGC TCGCGCTTGC CGCCCAGGTC GCCGAGCGGC ACCGCATTGC GGTGCTGACC AATAATTGCC GCCTGTTGAT CGATCACATC GCTTATCTGA ATCCGCCTGT CGCGCGGCTG TTCGGGCCGC ACGTTTACTC GTCGGCGGCT TTTGGCGCCG CTAAGCCGGC GGCGCAAACC TATCTGCGTT GTCTGGAGCA GATCGGCGTG CCCGCGGCCC AAACGCTTTT CGTCGACGAC ACGGCCGCCA ACGTGAACGG CGCGATCGAT GCAGGACTGC AAGGACACAT GTTCGTCAGC GTCGGCTCAT TGTCGGAAGA CTTGCAGCGT CGCGGTTTGA TATAG
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Protein sequence | MTASITLVLF DMEGVLSHYD RAARVDHLAA TAGCTADTVR HAIWGSGLEA RADAGEISDD EYLRELGMLL NHPISRDEWL AARHASITPN QDALALAAQV AERHRIAVLT NNCRLLIDHI AYLNPPVARL FGPHVYSSAA FGAAKPAAQT YLRCLEQIGV PAAQTLFVDD TAANVNGAID AGLQGHMFVS VGSLSEDLQR RGLI
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