Gene Bphyt_5290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5290 
Symbol 
ID6277358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1470065 
End bp1470469 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content59% 
IMG OID642616376 
ProductPRC-barrel domain protein 
Protein accessionYP_001889019 
Protein GI187919988 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGAC TACAGATCAA ACCGCTGGCC GCCACCGCCC TGCTTCTCGC CACACTGGCC 
TCGTATGGCC ATGCTTACGC TCAGGGCGCG CCTCAGGCGA TTACGGAGAA ACGGACGGAC
GTGGTGCAAC TCGCAAGTGG CTACCGCGCG TCGAAGTTGA GTGGCGCCGA TGTCTACAAC
AAATCCAAGG ATACGATCGG CACGTTGGAC GATCTGATCG TCTCACCGAG CGGCGACCGC
AGCACGTATG CAATTCTGTC GGTAGGGGGA TTCCTCGGCA TGGGCAAGCA TCTGGTCGCC
GTGCCGTTCA ACGATCTGCA GATCAATAAC CGCCGTGTGG TGCTGCCCGA AGCCACCAAA
AAGTCGCTCG AGGCGTTGCC TGAATTCAAG TACGCTCCGG ACTGA
 
Protein sequence
MQRLQIKPLA ATALLLATLA SYGHAYAQGA PQAITEKRTD VVQLASGYRA SKLSGADVYN 
KSKDTIGTLD DLIVSPSGDR STYAILSVGG FLGMGKHLVA VPFNDLQINN RRVVLPEATK
KSLEALPEFK YAPD