| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5179 |
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| Symbol | |
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| ID | 6278284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1347027 |
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| End bp | 1348544 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642616265 |
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| Product | integrase family protein |
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| Protein accession | YP_001888908 |
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| Protein GI | 187919877 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.285991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAGG GAGACCCCCA CCGCTACATC ACGCAAGCTG CTCAAAACGC CCCGAATTCC
CATCGATTTA CGTGCTCACG CTCATACTAC GACGACTTCG ACGACAAGCC GCGCTCAGTG
CCCGAAGTCC GCCAGGCCGA TATCCTCGGG CTTCACATTA ATGGTCGCCT GTTCCGGCTT
GACCTTAGCC GGTACCCTTC TTCGTACGGC ACCCTCCAGA AGCATCTGCT GGTCTTCCTG
CTGGGTGAAG ACCTGCATAT CTCGACCTGC TTCAATGTTC TGAACGCAGC AATGCACCTT
GATGTTCACG ATGTCGAACA CATCGTCGAA GCCGGGCCAA CCCGCATATC AACGATATGG
ATGACGCTGC GCGGCCGTCA GTTAGTCGTT CACGCGTATC GTTTCGTCAA GGCTGTGCTG
CGTTTACTAT GCCGGCATCG CCTGTATGGC TGGTCTGAGT CATATCTGAC CTATGTCAGC
ACTTCCCTGC CCGGCCCCGC AACAGACAAG TATGCCCGTG TGCGATTAGG CGATGTGTTT
CTGTCCGTTG ACGAGGAAGC CGCGATTGTG CGCTACCTGG ACGAAACGTC GGACCTCATC
AGGACAAGCG GCTGGTCAAG TCTTCCATAC GAGGCACTTT GCGATGCAGC GATGGTGCTC
TGTTCCTATC AGTTTGCCAT GCGTCCGATT CAGGTCGCGA TGCTGACGAT GCGTGACGTA
CGGATATGGG ATCCGGAACA CAGTGGCGAG CCGACCGTGC ATCTCACGTT TCTCATGGTC
AAGCAACAGG GGAAGCTTCG AAAGAGACCG ATGGTCCGTC GTGTGAAACA GGAATGGGGG
ATATTGTTCA TCGCGCTGGT TGCATATGCA GACTCTCAGG GGCGCGATGG CAATGATCGT
GTCTTCGGCG TCAGATCCAA TCATGAAGCC GGCTCTCGCA TTGCTCGCCG CGTGGCAAGC
CTGATCGGCG ACGATGCTTG CGCTATGGAC CTTCGTCATA CCGCAGCGCA GCGACTCGTT
GACGCCGGTG CCAGTCATGA GGAGCTCGCT GAATTCATGG GTCATTCGCA TGTGCAGACC
GGGCTGGTTT ACTACGCGAC ATCGGCCACC CACGCGGAGC GGGTGAACCG GGCGCTCGGT
GCGTCGGACA TATACCGGCG TGTGGCGAAG ATTGCGCACG ACCGGTTCAT CTCCCCGGAA
GAGCTCACCC AACTCAAAGG TGAGCAACAG ATTGCCGGCG TGCCTCACGG CATTCCGATC
GCCGGTATCG GCGGCTGCAA ATCTGGTCAG CCCGCTTGCC CCTACAACCC GGTCACGTCG
TGCTACGGAT GCAGGAAGTT CATGCCCCTG CACGACAAGA CGATGCATGA GCGCGTGCTG
GCCGAGATGC GCGAAGTGGT GATCTTCTTC GACCAGAGTT CCCGCGGCGA CACAAGGTCG
CCGGCCTATC TGCAATTGCA GCGCACGATC GCTGAGATAC AGGCAGTCAT CGAGGAACTG
GAAGGCGAGA ATCGATGA
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| Protein sequence | MPEGDPHRYI TQAAQNAPNS HRFTCSRSYY DDFDDKPRSV PEVRQADILG LHINGRLFRL
DLSRYPSSYG TLQKHLLVFL LGEDLHISTC FNVLNAAMHL DVHDVEHIVE AGPTRISTIW
MTLRGRQLVV HAYRFVKAVL RLLCRHRLYG WSESYLTYVS TSLPGPATDK YARVRLGDVF
LSVDEEAAIV RYLDETSDLI RTSGWSSLPY EALCDAAMVL CSYQFAMRPI QVAMLTMRDV
RIWDPEHSGE PTVHLTFLMV KQQGKLRKRP MVRRVKQEWG ILFIALVAYA DSQGRDGNDR
VFGVRSNHEA GSRIARRVAS LIGDDACAMD LRHTAAQRLV DAGASHEELA EFMGHSHVQT
GLVYYATSAT HAERVNRALG ASDIYRRVAK IAHDRFISPE ELTQLKGEQQ IAGVPHGIPI
AGIGGCKSGQ PACPYNPVTS CYGCRKFMPL HDKTMHERVL AEMREVVIFF DQSSRGDTRS
PAYLQLQRTI AEIQAVIEEL EGENR
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