Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5175 |
Symbol | |
ID | 6280478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1341829 |
End bp | 1343262 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642616261 |
Product | Integrase catalytic region |
Protein accession | YP_001888904 |
Protein GI | 187919873 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGGGC GTGGCCTGAT CACGGCAACC ATGCGCGAAC TCGAACGAGT CAAGGTCATC GAGGCGGTCA TTGAAGGCCG CTTGCGCTGC TTTCAGGCAG CCGAGCGGCT GGACCTCTGT GAGCGGCAGA TCAGCCGGCT GTGCCGGCGT TATGAGGCCG ATGGTCCAGC CGGGCTGGTG TCGGGCAAGC GTGGCCAGCC GAGCAATCGC GAGTTGCCCA TCGATCTGCG TGCACGGGCC ATGGCGCTGG TGCGTGAGCG CTACGCCGAT TTCGGACCGA CACTCGCGTG CGAGAAGCTG GCCGAATGTC ATGGCCTGGT GCTGGCGAAG GAAACCGTGC GGCGCTGGAT GCGCGATGCC GGGCTGTGGG TGCCGCGCCG GCAACGGCCA CCGAAGATCC ACCAGCCGCG TGCCCGGCGC GCGTGCCTGG GCGAACTGGT GCAGATCGAC GGCAGCGACC ACCGGTGGTT CGAGGACCGG GCGCCAGCCT GCACGCTGCT GGTGTATGTC GACGACGCCA CCAGCCGGCT GATGGCGCTG CATTTCACGG CCACGGAGTC GACCTTCAGC TACTTTGAGG CCACGCGTGC GTACCTCGAA CGCTACGGCA AACCGGTCGC GTTCTACAGC GACCGCGCCA GCGTCTTCCG GCCAACGTAC AGCCGCACCG GCGCGCGGGG CGTCACGCAG TTTGGCCGCG CGATGTACCA GCTGAACATC GACACGTTCT GCGCGAACTC AAGCCCCGCC AAGGGCCGCG TGGAGCGCGC GCATCTGACA CTGCAGGACC GCCTCGTGAA GGAACTGCGG CTGCGCGGCA TCCAGACCAT GGAAGCGGCC AATGCCTGGG CGCCCGCCTT CATGGCCGCC TACAACGCGC ACTTCGCGAA GCCGCCGCGG AGCACGTTCG ACGCGCACCG GCCGCTGCGT GACGGTGAGG ATCTCGACGC GATCCTGACC TGGCGGGTGA CGCGCAAGGT GTCGGAATCG CTGACGGTGC TGAATGACCT CATGATCTGG CTGCTGGAGG ACACACCGGC TACGCGCCGG CTGATCGGCC ACTACATCGA CGTGTGGGAG TATCCGGACG GTCGCATCGA ACTGCGTGCC GGCGGTGTCG CGCTGCCCTG TGTGCCGTAC GAGCTCCCGG AAATCGACCA GGGGGCCGTG GTTGAGCACA AGCGGCTGGG GCCTGTGCTG CAGGTCGCGC AGGCGATGCA GGCACAGCGC GATAACCGCC GTGTCTCAGG CTCGCCGTCA CGCACGAATC GCGGCGCGGC GGTACGCAAA CCGGCAACCC TGCCCGGCAC GAAGAAGGCG CGCGCGTTCA CACAGGCCGA GCTGAATGAA ACGATCCTGC AGCTCGCCAC GCAACACGCC AAACAGCCAG AGCCAGCTTC AAAACCAGCC CGCCGGTCTG CAAGGGCTCA CTGA
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Protein sequence | MNGRGLITAT MRELERVKVI EAVIEGRLRC FQAAERLDLC ERQISRLCRR YEADGPAGLV SGKRGQPSNR ELPIDLRARA MALVRERYAD FGPTLACEKL AECHGLVLAK ETVRRWMRDA GLWVPRRQRP PKIHQPRARR ACLGELVQID GSDHRWFEDR APACTLLVYV DDATSRLMAL HFTATESTFS YFEATRAYLE RYGKPVAFYS DRASVFRPTY SRTGARGVTQ FGRAMYQLNI DTFCANSSPA KGRVERAHLT LQDRLVKELR LRGIQTMEAA NAWAPAFMAA YNAHFAKPPR STFDAHRPLR DGEDLDAILT WRVTRKVSES LTVLNDLMIW LLEDTPATRR LIGHYIDVWE YPDGRIELRA GGVALPCVPY ELPEIDQGAV VEHKRLGPVL QVAQAMQAQR DNRRVSGSPS RTNRGAAVRK PATLPGTKKA RAFTQAELNE TILQLATQHA KQPEPASKPA RRSARAH
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