Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5163 |
Symbol | |
ID | 6278615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1329078 |
End bp | 1329878 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642616250 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001888893 |
Protein GI | 187919862 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.752171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAAT CGAGCAGCCC CGTCTGCGTG GTGACGGGAT CGGCTTCGGG CATCGGCGCG GCGACCGCGC TGCGCTTCGC GCAGGCGGGC TGGTCGGTGG CCATAGGCAA CTTCGACGAC AGCACGCGCC AAACAGCGCT GTCCGTCGAA GCGGCCTGCC GCGACGCCGG CGCGTCTACG CTGATTTTCG ACGCGGATGT CGGCAACGAT GCGCACTGCC GCCGCGCGAT GGACACCGTG GCGAGCCGCT GGCAACGTGT CGACGCGCTG ATCAATTGCG CGGGCACGAC CCGCGTGATT GCGCACAACG CGTTCGACGA GATCGACGCT GTCGAGTTCG AGCGCGTGTA CCGCGTGAAC CTGATCGGGC TGTATCAGAT GACCCGCGCA GCAGTGCCGT TGCTGCGCGA ATCGGCCGGT CTATCGACGG TGAAACGCAG TACCAGCGTG GTCAACATTT CGTCGCTGGC GGGCCTGAAC GGCACCGGGT CGTCGATCGC GTATGCGGCG TCGAAAGGCG CGGTGAATAC GCTGACGCTC TCGCTTGCGC GCAGTCTCGC GCCGCATGTC CGCGTCAACG CGATCGCGCC CGGCATGGTC GACGACGGCC TGTTGCTGCG CGTGCTCGAC CCGCAAGCCT ATGACGGCGT GCTAGCCAGA ATGACCGAAC AGGCGCCGCT CAAACGGGTG TCGATGCCCG CCGAAATCGC GGACCTGGCC TGGTTTCTCG CGACGCAGGC GCCCGCCATG ACCGGCCAGG TGATCGCCGC GGAAAACGGC TTGCTGCTGA ACGGCGGTTG A
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Protein sequence | MTQSSSPVCV VTGSASGIGA ATALRFAQAG WSVAIGNFDD STRQTALSVE AACRDAGAST LIFDADVGND AHCRRAMDTV ASRWQRVDAL INCAGTTRVI AHNAFDEIDA VEFERVYRVN LIGLYQMTRA AVPLLRESAG LSTVKRSTSV VNISSLAGLN GTGSSIAYAA SKGAVNTLTL SLARSLAPHV RVNAIAPGMV DDGLLLRVLD PQAYDGVLAR MTEQAPLKRV SMPAEIADLA WFLATQAPAM TGQVIAAENG LLLNGG
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