Gene Bphyt_5151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5151 
Symbol 
ID6278139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1316865 
End bp1317242 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content56% 
IMG OID642616239 
Productprotein of unknown function DUF485 
Protein accessionYP_001888882 
Protein GI187919851 
COG category[S] Function unknown 
COG ID[COG3162] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGC TTATGAGGAC TGTGCCACTC ATTGATCCGA ATGCGTTATT CATCGATAAG 
GTCAAAGTCG ATGGTCCCGC GCGTACGGTG CTGCAATCAG CGTCGTTCCG CCATCTGATG
TCAGTGAAGC GTCGCGCGAT TGTGCCGCTA CTTGGCACGA GTCTTCTGTT CACCTTCATG
GTTGCGTTGC TGGCCGGTTA TGCGCCGGGC TTCATGGCTT CGAGGGTAGC CGGTTCGTTC
ACCCTTGGCT ACCTGCTCGT CCTGGGGATC TACCTCGCAT GCTGGATTGT CTCGATAATC
TACGTTGTAC TGGCGAACAG AAAGTTTGAA GTGCTGGCGC TTGAGGTCGC CCGCGATCAC
CGGGGAGAGC CAAAGTGA
 
Protein sequence
MTELMRTVPL IDPNALFIDK VKVDGPARTV LQSASFRHLM SVKRRAIVPL LGTSLLFTFM 
VALLAGYAPG FMASRVAGSF TLGYLLVLGI YLACWIVSII YVVLANRKFE VLALEVARDH
RGEPK