| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5111 |
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| Symbol | |
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| ID | 6279127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1279747 |
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| End bp | 1280493 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642616201 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001888844 |
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| Protein GI | 187919813 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTTC AGAACAAGGT GGCGATTGTG ACCGGCGCAG CCTCAGGGCT CGGGCTTGCA
ACATGCAAGG GACTGGCGGC AGCCGGCGCC ATGGTGGTTG GTTTCGACCT CGACCAGGCA
CGGCTCGACG AAGCGCTGGG TGCTGACATG CAGGGTCTCG CGGTCGACGT CTCCAATGAA
TCCAGTGTGA AGTCCGGTAT CGACGCCGTG GTGGCTATGC ATGGACGCGT GCATGTGGCG
GTCAATTGCG CAGGCATCCT CGGTCCTTGC AAGACGTTAT CGAAGGGACA ACTGTTTCCC
TCCGACCTGT GGAATCGCGT GCTGGGCGTT AACCTGACCG GGACTTTCAA TGTCATTCGT
CACGCCGCGC TCGTGATGAG CGCAAACGAT CCCGAAGAAA CCGGAGAGCG TGGCGTGATC
ATCAACACGT CTTCGGGCGC GGCCCGTGCC GGGCAGATGG GACAGGCCGC GTATAGCGCG
AGCAAGGCGG GCGTGATCGG CATGACGCTG CCGATCGCGC GCGATCTCGC CGAACACGGT
ATCCGGGTCG TGTCGATTGC GCCGGGACTT TTCGAGTCGG GCATGTCGGC CGGCATGCCG
CAGAAAGTCT CGGACAGCTT GATCGAAAAG ATGCTGTTTC CAAGGCGTAT GGGTAAGGCG
GAAGAGTTTG CCGGGCTCGT GCGGCACATC GTCGAGAACG CGTATCTGAA CGCGATGACG
ATCGATATCG ACTGCGGCAT GCGTTAA
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| Protein sequence | MNLQNKVAIV TGAASGLGLA TCKGLAAAGA MVVGFDLDQA RLDEALGADM QGLAVDVSNE
SSVKSGIDAV VAMHGRVHVA VNCAGILGPC KTLSKGQLFP SDLWNRVLGV NLTGTFNVIR
HAALVMSAND PEETGERGVI INTSSGAARA GQMGQAAYSA SKAGVIGMTL PIARDLAEHG
IRVVSIAPGL FESGMSAGMP QKVSDSLIEK MLFPRRMGKA EEFAGLVRHI VENAYLNAMT
IDIDCGMR
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