Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5098 |
Symbol | |
ID | 6280432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1262532 |
End bp | 1264232 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642616188 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001888831 |
Protein GI | 187919800 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.183916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGTA CGAATTCGGA CACACTGGTT CATCGCTTTG TGCACTGGGA GCGTGTGCAG CCTGATACAC CGTACCTCAC CGAGTCGATG CCGGACGGAC AGGTCGTGGA GTACACCTGG CAGGAGGTCG GCGATCAGGC CCGGCGCATG GCTGGCTATT TGCAGTCGTT GCAACTGCCG CCGCGCAGTG CGATCTCGAT CGTCGGCAAA AATAGCGCCC ACTGGATCAT CGCGGATCTG GCGATCTGGA TGGCCGGTCA CTTCTCGGTA CCGCTCTACA CAACCATCAA CGCGGACACT GCGCAGTACA TCTTCGAGCA CTGCGACGTT CGTTTGCTGT TCGTCGGCAA GCTTGACGGC AAGACTGACG GCTGGAATGA AATTCGCAAA GCAGTGCCGC CGCATGCGCG GTTGATCGGC TTGCCCATGT CACCCGTGCC GGAGGCCCTC CAATGGGACG ATATCGTCGC GAGCCAGGCG CCATTACGGG ACGTTCACCT GCCGGCTCCA GGCGAACTGG CTACGATCAT CTATACATCG GGCACCACCG GCCGTCCCAA GGGCGTCCTG CACAGCTTCG GGACGATCTT TGCCTATGCG GCGCAGGCAG GTGAATTCTG CGGCTTCACT CCGGCGGACC GCGTTCTGTC CTATCTGCCG CTCGCACACA CGGCCGAGCG CTCCTTCGTC GAATCGAATT CGCTTTGCCA CGGTTTCCAG GTTTTCTTCA ACGATAGTCT TGCTACTTTC GTTCAGGACT TGCATCGCGC GCGACCGACT GTATTCATTT CGATGCCGCG ACTGTGGACC AAGTTCTATC AGGGCGTCTG CGCGAAACTT CCCGCGAGCC AGCAAGCCTT GCTTGAGACG GCGAGCCCCG AAGCCGCGGT CATTAAACAG CAGATCCTCA CGATGCTCGG GCTCGACGCG ACAAGAATCG CCTTTACCGG CTCGGCGCCG CTGCCTGAGG AAATCACGAA CTGGTATCGC ATGCTCGGCC TCGAGTTACT GGACGTGTAC GGCATGACGG AGAACTTCTC GTACTCGCAT TACAGCCGCC CAGGGCTCGT GCGGCCCGGC TATTGCGGCC AGGCCATGCC GGGCGTCGAA TGCCGGATTG CCGGGAATGG CGAGATTCTG CTCAAAGCGC CGACCATGAT GCTCGGCTAC TACAGGCAGC CGGACTTGAC CGCGCAAAGC ATGACCGAGG ACGGCTTCTT CAAAACCGGC GATTGCGGCG AACTCGACGA ACTCGGCCGT TTGAAAATCA CAGGGCGGGT GAAAGAAAAC TTCAAGACCA GCAAGGGAAA ATATGTGGCT CCCGCGCCCA TCGAGAACAA GCTGAGTCAT GCAAAAGTTG AAGCCGTGTG CGCGACGGGG CCGGGGCTCG CCCAGCCGTT CGCGCTGTTG ATGCTGTCGG CCGCCGCGCG CGGAGAACTC CAGGGCACGC CTGCGTATGA TGCCTTGCGT GCCGAGCTGC GCGGCATGCT CGACAAGGTC AACGACACGC TTGAAGATCA CGAGAAGCTC GCCTTCGCCG TGGTCGTCGC GGATGCCTGG ACGTCCGACA ATGGCTTGCT CACGCCAACC ATGAAGATCA GGCGCGGCGC AATCGAGAAA CGTTATCTGC CGATGGCCCA GGCGTGGGCT GAACTCGGAC AACCCGTCAT ATTCGAAACG CAGTCCGTCA AGACGCAATG A
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Protein sequence | MSGTNSDTLV HRFVHWERVQ PDTPYLTESM PDGQVVEYTW QEVGDQARRM AGYLQSLQLP PRSAISIVGK NSAHWIIADL AIWMAGHFSV PLYTTINADT AQYIFEHCDV RLLFVGKLDG KTDGWNEIRK AVPPHARLIG LPMSPVPEAL QWDDIVASQA PLRDVHLPAP GELATIIYTS GTTGRPKGVL HSFGTIFAYA AQAGEFCGFT PADRVLSYLP LAHTAERSFV ESNSLCHGFQ VFFNDSLATF VQDLHRARPT VFISMPRLWT KFYQGVCAKL PASQQALLET ASPEAAVIKQ QILTMLGLDA TRIAFTGSAP LPEEITNWYR MLGLELLDVY GMTENFSYSH YSRPGLVRPG YCGQAMPGVE CRIAGNGEIL LKAPTMMLGY YRQPDLTAQS MTEDGFFKTG DCGELDELGR LKITGRVKEN FKTSKGKYVA PAPIENKLSH AKVEAVCATG PGLAQPFALL MLSAAARGEL QGTPAYDALR AELRGMLDKV NDTLEDHEKL AFAVVVADAW TSDNGLLTPT MKIRRGAIEK RYLPMAQAWA ELGQPVIFET QSVKTQ
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