Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5084 |
Symbol | |
ID | 6280166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1247811 |
End bp | 1249322 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642616174 |
Product | diguanylate cyclase |
Protein accession | YP_001888817 |
Protein GI | 187919786 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.494089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0445442 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCGT CACTACCGCC TTTTGTGCGG CGATCCATTT CGTCATCCGC GTCGCGGGTA TTGTCGCCAT CTGGCGTGAT TGTTTGTGGC GTTCTGCTGA TACTGTTCAC GTGCAGTCTT TGCGCGTGGG TGCTTTTCGA GTCGCGTAAA GATGCCTACA ACCGCGCTGA GGAAAACGCG CGGAACCTGA TGCTGGTTAT CGAGCGGGAC ATCGCTCGCA ACATCGAGCT CTACGATCTG TCGCTGCAGG CGGTAGTGGA AGGGGTTGCG GATCCGCAGA TGATGGCGCT CCCCGCGAAG ATCCGCAACG GGGTGCTGTT CGACCGCGCC GCTTCAGGCA AGTACCTTGG CTCCATCTTC GTGATGAATG AGCGTGGGGA TATCGTTCTG GACTCCGGAT TCTTACCGGC GCGAGCGGGC AGTTTCGGCG ATCGTGACTA CTTCCGCTTT CATCGCGATA ACGGCAACAC TGGCCTCTAC ATCAGCAAGC CCTACGAGTC ACGACTGCGG GACGGGGCGC TCACGATTGC CCTGAGCCGC CGGATTTCGC ACCCGGACGG CTCTTTCGGC GGTGTCGTGG TCGGCACGCT AAGCATCGAC TATTTTCGCG CTTTGCTGGA CGGCTTGTCC GTGGGGGAGC ACGGCACCGC GGCAGTGATC GAGACTAACG GCGCCATGAT CACGCGCTTA CCCTACGATC CGCACGTGGT CGGACGCGAC ATCCAGAACG CTCCGGTTTT TATTCAGGCA ATGTCGACGA AGGAAGGTGC CTTCATGGGC ACCGCCTCGA TCGATGGGAT CCGCAGGCTC TACGTGTACA AGCACTTGCA CGGGCTTCCG ATCATCGTCG ACGTGGCGCC TGCGGAAAGC GACGTTTACG CTGAATGGCG ACGCCGGGCC CTGCGGCTCG AGATCGTGAT GGCGGTGTTC AGCATAATTC TCGGGGCGGG ATCTTTGCTG TTGTCGCGCG AACTGCGGCG GCGGCAGCGT GCGGAATCGA AACTGCAGCA CCTGGCGCGT ACGGACGCGC TCACGGGGTT GAGCAATCGC GGCACCTTCG ACGATACGCT GCAAAAGGAG TGGCAACGAG CCAACCGCTC GGGCCGTCCG CTCTCGTTGC TGTTCATCGA CATTGATCAG TTCAAGGCTT ACAACGACTA CTATGGTCAC CAGGCGGGCG ACGAGGTGCT GCGAGCCGTT GCCCAGTGTG TGGGCCTGTG CGTTCTACGA TCGGCGGACC AGGTGGCCCG ATACGGCGGT GAGGAGTTCG TGGTGACTCT TCCTGATACA GACGCAACCG GCGCTACAAA TGTCGCCGAA ACCGTTCGGC GCGCCGTATT CGATCTGAAT CTCGAGCACG TCCAAAGCCG GTATGGCCGG GTGACTGTGA GTATCGGCCT GGTGACCTCC GACGAGCGCG TCGCTCGTGA TGGCGCAACG CTGGTGAACA TGGCCGACTC GGCGCTATAT GAAGCGAAAT CAACCGGACG TAACCGGGTC TGCGAGGCGT AG
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Protein sequence | MRSSLPPFVR RSISSSASRV LSPSGVIVCG VLLILFTCSL CAWVLFESRK DAYNRAEENA RNLMLVIERD IARNIELYDL SLQAVVEGVA DPQMMALPAK IRNGVLFDRA ASGKYLGSIF VMNERGDIVL DSGFLPARAG SFGDRDYFRF HRDNGNTGLY ISKPYESRLR DGALTIALSR RISHPDGSFG GVVVGTLSID YFRALLDGLS VGEHGTAAVI ETNGAMITRL PYDPHVVGRD IQNAPVFIQA MSTKEGAFMG TASIDGIRRL YVYKHLHGLP IIVDVAPAES DVYAEWRRRA LRLEIVMAVF SIILGAGSLL LSRELRRRQR AESKLQHLAR TDALTGLSNR GTFDDTLQKE WQRANRSGRP LSLLFIDIDQ FKAYNDYYGH QAGDEVLRAV AQCVGLCVLR SADQVARYGG EEFVVTLPDT DATGATNVAE TVRRAVFDLN LEHVQSRYGR VTVSIGLVTS DERVARDGAT LVNMADSALY EAKSTGRNRV CEA
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