Gene Bphyt_5083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5083 
Symbol 
ID6279498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1246571 
End bp1247455 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content60% 
IMG OID642616173 
Producttranscriptional regulator, MarR family with acetyltransferase activity 
Protein accessionYP_001888816 
Protein GI187919785 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.569191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0231786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACAT CCGACATTCT CCAGGTTCGT AGCTTTAACC GCGTAGTCGC GGAAAGCATT 
GGCGCTATCG ACGATCATTT CCTCGGCCGG GGCCGCCCGA TGGGCGAATC GCGCCTGCTA
TGGGAGATCG GTGTCGAAGG CGCGGACATT CGTGCCCTAC GCGCGCGGCT AAATCTCGAT
TCGGGCTATA TCAGCCGCAC GTTGGCGTCT CTTGAACGGC GAAAACTTGT CGCTATCCTC
ACTCATCCAA ACGACCGCCG GGTACGCCGG GCTCGTCTGA CTCAGAAGGG CCTCGCGGAA
AGGGTCGAAC TCGAACGGCT TTCCGACGCG GTCGCGCTAC GCGCGCTCGA ACCGCTCGGC
GATGTGCAGC GCCGCAGACT GGTCGCGGCG ATGTCAGAGG TCGAGCGTTT GCTACAGGCA
TCTCTTGTGC ATTTTGCCGT TGAACAGCCA GATAGCGATG ACGCGCGGTG GTGCTTCGAA
CAGTATTTCA GCGAACTCGA TCAGCGCTTT GACGCCGGAT TCGACCGGTC CATCAGCCTT
TCGGCAGATG CCCACGAACT GACGCCACCG GAAGGCGCGC TGATCGTGGC GAGACTCCAT
GGAAGCCCGG TCGGCTGCGT CGCGCTGAAG TTTCATAAGA AGTCTCCGGC CGAACTCAAA
CGAATGTGGG TGAGCCCTTC CGCTCGCGGG ATGGGTGTAG GCCGCCGGTC GATCGTCGAG
GCGGAGAAGT GCGCCCGGCA AGCCAAAGCG CGCGTTATTC GTCTGGAAAC AAATCGAACG
CTGCACGAGG CGATCTCGCT ATACCGGCAG TGTGGATACG TCGAAGTCGA GGCGTTCAGC
GCGGAACCGT ATGCGCATCA TTGGTTTGAA AAACGGCTCG TCTGA
 
Protein sequence
MDTSDILQVR SFNRVVAESI GAIDDHFLGR GRPMGESRLL WEIGVEGADI RALRARLNLD 
SGYISRTLAS LERRKLVAIL THPNDRRVRR ARLTQKGLAE RVELERLSDA VALRALEPLG
DVQRRRLVAA MSEVERLLQA SLVHFAVEQP DSDDARWCFE QYFSELDQRF DAGFDRSISL
SADAHELTPP EGALIVARLH GSPVGCVALK FHKKSPAELK RMWVSPSARG MGVGRRSIVE
AEKCARQAKA RVIRLETNRT LHEAISLYRQ CGYVEVEAFS AEPYAHHWFE KRLV