| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5042 |
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| Symbol | |
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| ID | 6279966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1196281 |
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| End bp | 1197279 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642616133 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001888776 |
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| Protein GI | 187919745 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.363358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.505144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCG ACGCGCTCAC GCCTGTCGAG CCCGAGGCCG ATTCGCCGCT GTCCGGGCTC
GCGCACGTCG GTTTTCTGAC GCTGCCGAAC TTTTCGATGA TCGCGTTCAC CAGCGCGGTC
GAGGTACTGC GCATGGCCAA CTACGTGGGC CGCGCGCAGC ACTACCGGTG GTCGGTGATT
ACGCCGGACG GCGAGCCTGC GCGAGCGAGC AACGGCATCA CGGTGAAGCC CACCACGACG
CTCGCTGAAG CCGGCATGCC GGATGTGCTG ATCGTCTGCG CCGGCTGGCA CGTGCGAGAT
TACGTGGACG ATACGGTGAT CGCGCTGCTG CGCGAGGTCG CGCAAAAGGG CGTGCCGCTC
GGCGGTATTT GCACGGGCCC GTTTGCGTTG CTGGCCGCGG GCCTGCTCGA CGGCTATCGC
TGCACGGTGC ACTGGGAAGA CATGTCGCCG TTGCACAAGA GCTACCCGCA CGTGCGTTTT
GCCGACGAAC TGTTCGTGAT CGACCGGGAT CGCATGACCT GCACCGGCGG CACCGCGCCG
CTCGACCTGA TGCTGAAACT GGTGGGCATG CGGCTCGGTC ATGCGGTGGC GGCGCAGGTG
TCCGAGCAGT TCATCGTCGA ACGGATTCGC GGCTCGACCG ATTACCAGCA TATTCCCGTC
GACGCGCGGG TCGGTTTCTC GCGCGCGGAA CTCGTCGAGG TGGTGCGGCT GATGGAAGCG
AATATCGAGG AGCCCTTATC GCTCGACGAA CTCGCGCGGC TCGTGCATCT TTCGCAGCGG
CATTTGCAGC GCATGTTCAA GATGTTCCTG AGCGTGTCGC CCACGCACTA TTACCTGACG
CTGAGATTGC GGCGCGCGCG CGAGTTGCTG CGGAATACGG ACGCGTCGAT TGCGCGTGTG
ACGACCGTGT GCGGTTTTCA TTCGGCGTGT CATTTCAGCA AGGCGTATCG CGCGCAGTTC
GGTCATGCGC CGAGTGTCGA GCGGCGCTTG TCTGCTTAG
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| Protein sequence | MKRDALTPVE PEADSPLSGL AHVGFLTLPN FSMIAFTSAV EVLRMANYVG RAQHYRWSVI
TPDGEPARAS NGITVKPTTT LAEAGMPDVL IVCAGWHVRD YVDDTVIALL REVAQKGVPL
GGICTGPFAL LAAGLLDGYR CTVHWEDMSP LHKSYPHVRF ADELFVIDRD RMTCTGGTAP
LDLMLKLVGM RLGHAVAAQV SEQFIVERIR GSTDYQHIPV DARVGFSRAE LVEVVRLMEA
NIEEPLSLDE LARLVHLSQR HLQRMFKMFL SVSPTHYYLT LRLRRARELL RNTDASIARV
TTVCGFHSAC HFSKAYRAQF GHAPSVERRL SA
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