| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5024 |
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| Symbol | |
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| ID | 6279374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1175409 |
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| End bp | 1176968 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642616115 |
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| Product | Protein of unknown function DUF1800 |
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| Protein accession | YP_001888758 |
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| Protein GI | 187919727 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5267] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0654907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.102883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACT CACCGAACCT GAACGCCGCG GCGATTGCGC TCAACCGCTT CGGCCTGGGC
GCACGTGCCG ACGACACGCC GCCCGCCGAT CCGAAAGGCT GGCTGCTCGC GCAGTTCGAA
CAGTACCAGG CACGGCCGGC CGCGTGGGCG AATCAGCCCG ACTCCGTGGC GCTTTCTACT
GAACTCGTGC AGCAGCGCAT GCAGTTCAAT CAGCAGGCTC GTCAGAGTGC GACTGAGGGC
ACGGCGACGA GTGCCGCGAA CGTGCAAAAC GTGGCCGTGC CTGACGGGCA AATCCGTGCT
CAGGCAAACC CACAAACAAA CGCACAGGCA GACACGCCCA ACTCAACGCA AGCGAACGCG
CAAACCGCCA GGCAGGCCGA ACGAAAAGCA ATTCGCGGTG AAATACTCGA CATGTACCGC
TCATCGGTGA ATGCACGGGT GACGAGTGCG CTGACCACGC AGACGCCGTT CATCGAGCGG
CTGGTGCATT TCTGGGCCAA TCATTTCGCG GTTTCCACCG AGAAGCCCGG CGTCGCTGCG
CTGGCCGGTT CGTTCGAGGC CGAAGCCATT CGCCCGCACG TGCTGGGCCG TTTCGAAGAC
ATGCTGGTGG CCGTCGAACG TCATCCGGCC ATGCAGGTGT TCCTCGATCA GACGCGCTCG
GTCGGACCGG ACAGCACGGC GGCCATGCGT GCCGCGCAGC GCAACCCGGA GCGCAAGCGC
GGTCTGAACG AAAACCTCGC GCGCGAAATC ATGGAACTGC ACACGCTCGG CGTGCGCAGC
GGCTACAGCC AGGACGACGT CACCGAATTC GCCCGTGCGC TGACCGGCTG GAGCGTCGCG
GGCAATCCGG CCAACCCCGG CAACGCGGGT CGGCTAGCCA TGCAGCAGAA CACCGCGCCG
GGCACCTTCG TGTTTCGCGC CGCGCTGCAC GAACCCGGTT CGCGGACCAT CATGGGACGT
CGCTACGATC AGCTCGGAGA AGAGCAGGCG CTCGCGATCC TGCACGACCT CGCGAGCGCG
CCGGCGACCG CGCAGCATAT CGGCGGCAAG CTGGCACGTC ATTTCGTTGC CGACAATCCG
CCGCCCGGCG TGAGCGAACA TCTGGCTAGC GCGTTCGAGC GCAGCGGCGG CGATCTGCCG
GCCGTGTATC GCGCGTTGAT CGATATGCCG CAAGCGTGGT CGCCCACCGC AGTGAAATTC
AAAACGCCGT GGGAGTGGAC CATTTCCTCG ATGCGCGGCC TCGGCTGGCA GGACCTCGGC
AAGCTGCAGA CGGCGCCCAT TCTCACGCAG CTCGGTCAGC CGGTCTGGCG TCCCGGCTCG
CCCGCCGGTT ACGACGACAT CGCCGCGAGC TGGGCCGCGC CCGACGCGCT CGTGCGCCGG
GTCGAAGTGG CGCAGCGTTT CGCGTCGCAA GTCGGCGACC GGCTCGATGC ACGCGCACTC
GGCCAGACGC TGCTCGCCGG TTCGCTCAGT GCGCCGACTG CCACCGCAGT CTCGCGCGCC
GAAAGCGCCT CGACGGCGAT CGCTTTGTTG CTGGTCTCGC CGGATTTTCA ACGGAGATGA
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| Protein sequence | MANSPNLNAA AIALNRFGLG ARADDTPPAD PKGWLLAQFE QYQARPAAWA NQPDSVALST
ELVQQRMQFN QQARQSATEG TATSAANVQN VAVPDGQIRA QANPQTNAQA DTPNSTQANA
QTARQAERKA IRGEILDMYR SSVNARVTSA LTTQTPFIER LVHFWANHFA VSTEKPGVAA
LAGSFEAEAI RPHVLGRFED MLVAVERHPA MQVFLDQTRS VGPDSTAAMR AAQRNPERKR
GLNENLAREI MELHTLGVRS GYSQDDVTEF ARALTGWSVA GNPANPGNAG RLAMQQNTAP
GTFVFRAALH EPGSRTIMGR RYDQLGEEQA LAILHDLASA PATAQHIGGK LARHFVADNP
PPGVSEHLAS AFERSGGDLP AVYRALIDMP QAWSPTAVKF KTPWEWTISS MRGLGWQDLG
KLQTAPILTQ LGQPVWRPGS PAGYDDIAAS WAAPDALVRR VEVAQRFASQ VGDRLDARAL
GQTLLAGSLS APTATAVSRA ESASTAIALL LVSPDFQRR
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