| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4912 |
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| Symbol | |
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| ID | 6279166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1037439 |
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| End bp | 1038122 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642615998 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001888646 |
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| Protein GI | 187919615 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000643294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.00900686 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGAGC GTCTGTTAGT AAAACTATCT GGGGTTGTGT TGGCATGCGG CGTGATGGCC
GGTTGCGCAA CACAGGGCAA CAACTTGGCG ACCACACCGG AGGCTTTTAA TAAGCAACTC
GCGGATGCCG ATACCGTCGC AAAGGGCGGT GATCAGGATC GCGCTATCGC GCTTTATCAG
CAGCTTTCCA AATCCGATCC GACGCGTGAA GAACCCTGGT CGCGTATTGC GCAGATCCAG
TTCACGCAAG GTCATTACGG CCAGGCAATC GTTGCCGCGC AAGAAGCGCT GCAACGCGAC
CAGACCGATC GTCAGGCCAA GAGCGTGCTG GCGGTGGCCG GCTTGCGCGT CGCCACGCAA
TCGCTCGGCG AATTGCGTCA GGACGCGTCG CTCGCGGGCG ACGCCAAGTC GGACGCGCAA
GCGCTCGCCA AGCAACTGCG CGACACGCTC GGCGAAGCCA CGCTGTTCCC GCCCGACCCG
AGCGACAAGC CGGCGGTGAA GAAGAAGCGC GTGGTTCGCC ACGTCGCCAA GGGCAAGCCC
GCAGCGGAGA CGCCGGACGC TACGACCAGC GCCGCGGCGC CCGCCGCCAC GCCGGCAGCT
CCAGCTGCGC CGGCAGCGCC CGCAGCACCC GCCAAAGCCG CGCAAAGCGG CGGCGCGTCC
GATCCGTTCA GCGCGCTGCG CTGA
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| Protein sequence | MNERLLVKLS GVVLACGVMA GCATQGNNLA TTPEAFNKQL ADADTVAKGG DQDRAIALYQ
QLSKSDPTRE EPWSRIAQIQ FTQGHYGQAI VAAQEALQRD QTDRQAKSVL AVAGLRVATQ
SLGELRQDAS LAGDAKSDAQ ALAKQLRDTL GEATLFPPDP SDKPAVKKKR VVRHVAKGKP
AAETPDATTS AAAPAATPAA PAAPAAPAAP AKAAQSGGAS DPFSALR
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