Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4896 |
Symbol | |
ID | 6279704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1019200 |
End bp | 1020894 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642615982 |
Product | NERD domain protein |
Protein accession | YP_001888630 |
Protein GI | 187919599 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0805838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCA TAGTTCCCGA CGACTGGAAG AGCCTCGCCG CGACCGGCGC GGCGGCTCGC GAACGCGAAA CGCTGGCGTT GCTGGAAGAG ACGCTGCCCG ATGGCTACAC CGTTTATCAC GGCGTGCACT GGACGCGCCT GAACCAGAAC TTCTCGGTGT TCGGCGAAGC CGACTTCGTG ATCGTCAGCC CGGCCGGGCG CGTGATGATC GTCGAACAGA AAACCGGCTT TCTGCGCGAA ACGCCGAAAG GGCTCGTCAA GGTCTATCTG CAAACCGAGC GCAACGTGGC GATCGCGCTC GCCCACACCA TCGAAAGTTT GCATCGGCGC TTTACTGCCG CGTTCGGCGC GGGCACGTAT TTCGTCGAGG AATTGCTGTA TTGCCCGGAT CACGTCGTCA AGGACGCGGC GATCGCCGGC GTGAATCCCG CGCGAATCGT CGATGCAACG CGTAAAGACC GGCTCGCGGC GATCGTCCGC GAAGCCTTGC CCGCAGATGA ACCACGTCTA GCCTGCGCGC CGAAAATTCA CCACTTCCTC GCCGACGAAC TGGCGCTCAC CCCCGACGCC AGCGCGTTGG TCGGCCAGGC GGGCACGCTC GTCACGCGTC TCGCGGGCGG TCTCGCGACC TGGGCGCGGC GGCTCGAATT CGCGCCGTTC CGGCTGCGCG TGATCGGCAC GGCCGGCTCG GGCAAAACGC AACTCGCGGT GCAAGTGATG AAGGACGCGG TGGCGCGCGG CCAGACGCCG CTATACGTGT GCTTCAACCG GCCGCTGGCG GACCACATCG CGCGAGTCGC GCCGCCCGAA GCGAAGGTGG CGAACTATCA CCAGCTCTGC GACTGGATTG CGCGCGACGC GGGCCGCGCG CCGGATTTTC AGGCGGGCGA TGTCTTCGAT CAGCTCGAAA CCACGTTCGC CGACACACCG ATCGATCCGC GCTGGCAGTT CGACGTGCTG ATCGTCGACG AAGGGCAGGA TTTCCAGCAG CCGTGGGTGG CGGCACTCGA GCGTCTGTTG CGCCCCAACG CCGCGTGGTG GTGGCTCGAA GACCCGCTGC AAAATCTGTA TATGCGTGAA CCCGTCGCGC TGCCGGGCTG GACCACGCTG AAGGAAACCA CCAACTATCG CAGTCCGCGC GACATTCTCG ATTATGTGCG CGACGTGGTC GGCGCTTCGG TTCCGGTCGC CGCCGCGCTC GCCTCGGGCA GTCCGTTCGA CGGCTCCGAC ATTTCGCTCT CGGTCTACGA CGAAGCGAAC GCCGCCGAAG GCAGCATCGA GGCCACCAAG CGCGCGATCA CGCAGGCGCT CTCGCTCGGC TTTCGCAAGC AGGACATCGT GGTGCTGTCG TTTCGCGGCC GCGAAGGCTC GGCGATGAGC GCTTTGGATC ACCTCGGGCC GCATCGGTTG CGCAGTTTCA CCGGCAAGTA CGATCTGTTC GGCAACCCGG AGTACCGCGA GGGCGACGTG CTGTTCGAGT CGATCTACCG CTTCAAGGGG CAGGCGGCGC CGTGCGTGAT TTTTACGGAG ATCGACTTCG CGACTTTCGA CGAACGCATC GCGCGCAAGC TATTCGTCGG CGCCACGCGC GCGACCATGA AGCTGATCGT CGTCGCGTCG CAGCGCGCCG CTCGGCATCT GCATTTGCGC GACGGCAAGG AGAGCCGCGA AGTGAAGGAA GCGAAAGAGG TCTAA
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Protein sequence | MARIVPDDWK SLAATGAAAR ERETLALLEE TLPDGYTVYH GVHWTRLNQN FSVFGEADFV IVSPAGRVMI VEQKTGFLRE TPKGLVKVYL QTERNVAIAL AHTIESLHRR FTAAFGAGTY FVEELLYCPD HVVKDAAIAG VNPARIVDAT RKDRLAAIVR EALPADEPRL ACAPKIHHFL ADELALTPDA SALVGQAGTL VTRLAGGLAT WARRLEFAPF RLRVIGTAGS GKTQLAVQVM KDAVARGQTP LYVCFNRPLA DHIARVAPPE AKVANYHQLC DWIARDAGRA PDFQAGDVFD QLETTFADTP IDPRWQFDVL IVDEGQDFQQ PWVAALERLL RPNAAWWWLE DPLQNLYMRE PVALPGWTTL KETTNYRSPR DILDYVRDVV GASVPVAAAL ASGSPFDGSD ISLSVYDEAN AAEGSIEATK RAITQALSLG FRKQDIVVLS FRGREGSAMS ALDHLGPHRL RSFTGKYDLF GNPEYREGDV LFESIYRFKG QAAPCVIFTE IDFATFDERI ARKLFVGATR ATMKLIVVAS QRAARHLHLR DGKESREVKE AKEV
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