| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4880 |
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| Symbol | |
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| ID | 6277420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1004428 |
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| End bp | 1005420 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642615967 |
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| Product | aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein |
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| Protein accession | YP_001888615 |
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| Protein GI | 187919584 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.184039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.779449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCGTC ACGCCCGTTA TTCGCTTCAA CTCGCCGCCT TGCTCGCAGC ATTCACCACC
TTGAGCGCCA CCGCGCAGAC CGGCGGCAAC GCCGGCGAGC CGGCCAAGGT ACTGCGCATC
GGCTATCAGA AATCAGGCCT GCTTGCGATA CTCAAGGCGC AAGGCTCGCT CGACGAAAAA
CTCAAACCGC TCGGCTACAG CATCAAGTGG TTCGAATTCC CTGCTGGACC GCAACTGCTC
GAAGCGTTGA ACGCGAACAG CATCGACTTC GGCTACACGG GCGCGCCGCC GCCGGTGTTC
GCTCAAGCTA GCGGCGTACG CTTCGTGTAC GTCGGCGCCG AGCCTTCAGG AAGCCACGCC
GAAGCGATCC TCGTCAAAGG CGACTCGCCG TTGCGTAGCG TGGCCGATCT GAAAGGCAAA
CGCGTCGCGC TGCAAAAAGG CTCGAGTTCG AACTATCTGA TACTCGAAGC GCTCAAGAAA
GCGGGCCTGC GCTACGAGGA CATTCGCCCG GTGTATCTGC CGCCCGCCGA CGCGCGCGCC
GCCTTCGAAA GCGGCAGCGT CGATGCATGG GTGATCTGGG ATCCGTACTA CGCGTCCGCG
CAGCAGGCAC TGAAGGCGCG CACGCTGGCC GACTACACCG AACTCAATGC CCCATACAAC
TTCTACGAAG CGACGCGCGA CTTCGCGCAG CAGCATCCCG ACGTGATTGG CGCGATTCTC
GGACAGTTGC GCACCGCGGG GTTGTGGGTC AACGCGCATC CGGTGGAAAC CGCCGCGCTC
ATCGCGCCGA AGGTCGGTCT CGATCAGAAG CTGGTCGAAA CGTGGGTGCG CCGCTATCCG
TATGGCACCA CCGCCGTCAC GGACGAGATC GTGCGCTCGC AACAAATAGT CGCCGATGCG
TTCTACGGCG CCAATCTCAT CCCAGCAAAG ATCACCGTCA AAGACAGCGT CTGGCAAAAC
CGAGAAGTCA CGGCGGCTCT CGCCGCGAAG TAG
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| Protein sequence | MVRHARYSLQ LAALLAAFTT LSATAQTGGN AGEPAKVLRI GYQKSGLLAI LKAQGSLDEK
LKPLGYSIKW FEFPAGPQLL EALNANSIDF GYTGAPPPVF AQASGVRFVY VGAEPSGSHA
EAILVKGDSP LRSVADLKGK RVALQKGSSS NYLILEALKK AGLRYEDIRP VYLPPADARA
AFESGSVDAW VIWDPYYASA QQALKARTLA DYTELNAPYN FYEATRDFAQ QHPDVIGAIL
GQLRTAGLWV NAHPVETAAL IAPKVGLDQK LVETWVRRYP YGTTAVTDEI VRSQQIVADA
FYGANLIPAK ITVKDSVWQN REVTAALAAK
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