Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4875 |
Symbol | |
ID | 6279851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 999266 |
End bp | 999820 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642615962 |
Product | protein of unknown function DUF1089 |
Protein accession | YP_001888610 |
Protein GI | 187919579 |
COG category | [S] Function unknown |
COG ID | [COG3554] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000355198 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.582407 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGAAT TGCGGTGGGC ATCGGAAGAG GGCGACGGCA TCGAACATCT GGCGTTCGAC GCGCACGAGG ACGGCTTCGC GGTGGAAAGC GTCGTGGTCG GCCAGCGTTA CGGAAAGTCG TATGGCCTGC ACTACAAGGT GCGCTGCGAC GCGCACTGGC GTACGCGCTA TGCGTGGCTG AAGATCGTCG GCGGCGGCGA GCTGGAGTTG CATGGCGATG GCGCCGGCCA TTGGCACGAC GGACACGGCC TCGCGCTGAG CGCGATCGAA GGCTGCATCG ACATCGATAT CGCCGCTACG CCGTTCACCA ACACGCTGCC TATCCGTCGC TTGCAACTGG CCGAAGGCGA GCGCCGACCC ATTTCGGTGG CGTATATATC CACGCCCGAT TTGCAGGTCA CGCGTGTCGA ACAGGCGTAC TCATGCATCG AGTTGCATCG CGAGTATCGC TACGAGGGCA TCTTCCGCAA CTTCACGGCG GACATGAGGG TGGACGACGA CGGTCTCGTG ATCGACTATC CGACGCTCTT CACACGCCTG CCGCGCGAGC GTTGA
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Protein sequence | MRELRWASEE GDGIEHLAFD AHEDGFAVES VVVGQRYGKS YGLHYKVRCD AHWRTRYAWL KIVGGGELEL HGDGAGHWHD GHGLALSAIE GCIDIDIAAT PFTNTLPIRR LQLAEGERRP ISVAYISTPD LQVTRVEQAY SCIELHREYR YEGIFRNFTA DMRVDDDGLV IDYPTLFTRL PRER
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