| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4869 |
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| Symbol | |
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| ID | 6279074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 993471 |
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| End bp | 993950 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642615956 |
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| Product | Tripartite ATP-independent periplasmic transporter DctQ component |
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| Protein accession | YP_001888604 |
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| Protein GI | 187919573 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.120214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.368894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTCA TGAAGCGCCC AAATGATTTT CTGTTCCGCG CGCTGGTTGT CGTGGCGTCG
CTGAGTCTCG CCGTGCTGAG CGTGCTGGTG ATCTACAGCG TCGTGATGCG CTACGTCTTC
AGCGATGCAC CGGATTTCGT CGAGCCCATC GCGCTTTTGC TGGTGATCGT GATCGCCATG
TTCGGCGCCG CGCTCAAGGT CCGCGAAGGC GGCCATATCG GTCTCGATTC GCTCGTGAAG
AAATTGCCGC CGAAAGGGCA ACTCATCGCC ACGTCGTTTC AGCACATTTG CCTGATCGTG
TTTGCGGTGA TGATTTTTTT CGGCTGTCTG CAGATGGTGG AGGCCACCGC CGAAGACCGC
ATTCCAATTA TCGGTTTGCC TGAATCGTTG CGTTACTGCA TCCCGGTTAT TGCCAGCGTC
TGCATTGCAA TGTTCTCGAT CGAGAACCTG CTCGCGCTTT TCGCACAGAA ACAAAAATAG
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| Protein sequence | MRFMKRPNDF LFRALVVVAS LSLAVLSVLV IYSVVMRYVF SDAPDFVEPI ALLLVIVIAM
FGAALKVREG GHIGLDSLVK KLPPKGQLIA TSFQHICLIV FAVMIFFGCL QMVEATAEDR
IPIIGLPESL RYCIPVIASV CIAMFSIENL LALFAQKQK
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