Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4844 |
Symbol | |
ID | 6278003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 959507 |
End bp | 960334 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642615931 |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_001888579 |
Protein GI | 187919548 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.732367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.095648 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCC TTGCAGGCTG GAAGTGTCGT TTGGTCATGC TGGCGTTGTG CGCGGCAAGC GTCACCGCCC ACGCGGAAGA CCAGCTCGCC AAAGTGAAAA AAGCCGGCGA ACTGGTGGTC GGCACCGAGA TGCAGTTCGC GCCTTTCGAC TTCCTCGAAA ACGGTCAGCA GGCCGGTTTC AACAAGGACC TGTTCGCCGA AGTCGGCAAG GAAATGGGTG TGAAGGTGCG CTTTATCGAC TTGCCGTGGC CGAGCGTGCT GCCGGGTCTC GAAGCCGGCA AGTTCGACAT GGTCGGCGGC CCGCTGACCG TCACCAAGGC GCGCATGGAG CGCTACACAT ACACACTGCC CGTCGCGGAC GCCACCGACG CGCTGCTCAA ACGCGCGAAC GATTCGTCCG TCAAGCAATC GTCGGATATC GCGGGCAAGA CGGTCGGCGC GGGCAAGGGC TCGGCGCAAC TCGACCAGTT GAAGGCCTAT GTCGCCACAC TGCCGAAGCC GCCTGAAATC CGCGAATACG TCGACAACAA TCAGGCCTAC GCCGACCTCG CCGCCGGCCG CATCGCGGCG GTCGCGAACT CCATGACCAA CATCGCGTAC GTGGCCAAGC AGCGCCCGGA AACCTTCGCG GTGGTGCAGC CGCCGTTCGG CGCAAAGGTG TACTTCGCCT ACTGCCTGCG TAAAGACGCG GACAGCAAAC CGCTCGCCGA TGCCTTCAAC GCCGCGCTCG TGAAGATGCA TAACGACGGA CGCCTTGCCA CGCTGCAGAA GAAATGGTTC GGCGTCGCGA TGGATGCGCC GACCACCATG CCCACGCCGA ACTATTAA
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Protein sequence | MSILAGWKCR LVMLALCAAS VTAHAEDQLA KVKKAGELVV GTEMQFAPFD FLENGQQAGF NKDLFAEVGK EMGVKVRFID LPWPSVLPGL EAGKFDMVGG PLTVTKARME RYTYTLPVAD ATDALLKRAN DSSVKQSSDI AGKTVGAGKG SAQLDQLKAY VATLPKPPEI REYVDNNQAY ADLAAGRIAA VANSMTNIAY VAKQRPETFA VVQPPFGAKV YFAYCLRKDA DSKPLADAFN AALVKMHNDG RLATLQKKWF GVAMDAPTTM PTPNY
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