Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4841 |
Symbol | |
ID | 6278471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 957195 |
End bp | 958064 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642615928 |
Product | ABC transporter related |
Protein accession | YP_001888576 |
Protein GI | 187919545 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.981864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.138787 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCTA TCGCCGACAT GCCGTCTTCC GCGTCCTCCG CTACGGTCGG ATCATCGTCC GGCGCGCCGC TGATCGAAGT GCGCGACCTG CGCAAGCGCT TCGGCGAAGT CGAGGTGCTG CGCGGTGTCG ATCTCGAGAT CGCGCGCTCC GAAGTGGTGT GCATCATCGG CCCATCTGGC TCGGGCAAGA GCACGCTGCT GCGCTGCCTC GCCGCGCTCG AAACCTACGA TCAGGGCGAC GTGCGCATCG AAGGCGAACT GCTCGGCTAC AGCGAGCGCA ACGGCAAACG CGTGCGCGCG TCGCAAAGCG AAATCAACCG CGTGCGGCGC AACGTCGGCA TGGTGTTCCA ACAGTTCAAC CTGTGGCCGC ATATGACGGC GCTCGGCAAC GTGATGGAAT CGCTGCTGCG CGTGCGGCAT CTGTCACGCG ACGAAGCGCG CCGCCGCGCC AACGCGATGC TCGAAACGGT CGGCCTCGCG CATAAGGGCG ACGCATATCC GGCCAAGCTC TCGGGCGGCC AGCAGCAGCG CGTGGCGATT GCGCGAGCGC TCGCCATGGA ACCGCACATC ATGCTGTTCG ACGAGCCCAC TTCGGCACTC GATCCTGAAC TGGTCGGCGA AGTGCTGCAA GTGATGAAGC AACTCGCGCG CGACGGCATG ACGATGGCGG TCGTCACACA CGAAATGGGC TTCGCCGCGC AGGTCGCGGA CAAAGTCATG TTCATCGATC AAGGCCGGAT CGCCGTGCAA GGCAAACCGC GCGATGTCTT TCACGATGCA GGACAACCGC GCTTGCGGCA GTTCCTGCAA AACTATTTCG ACCGCAACGC GTTCTGGACG CGCGGTCCCG ACGACGCACA GCCGCTATGA
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Protein sequence | MNAIADMPSS ASSATVGSSS GAPLIEVRDL RKRFGEVEVL RGVDLEIARS EVVCIIGPSG SGKSTLLRCL AALETYDQGD VRIEGELLGY SERNGKRVRA SQSEINRVRR NVGMVFQQFN LWPHMTALGN VMESLLRVRH LSRDEARRRA NAMLETVGLA HKGDAYPAKL SGGQQQRVAI ARALAMEPHI MLFDEPTSAL DPELVGEVLQ VMKQLARDGM TMAVVTHEMG FAAQVADKVM FIDQGRIAVQ GKPRDVFHDA GQPRLRQFLQ NYFDRNAFWT RGPDDAQPL
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