Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4825 |
Symbol | |
ID | 6279649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 939359 |
End bp | 940240 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642615912 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001888560 |
Protein GI | 187919529 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0864247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0253512 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCCCG AATTCGACGT CGATCTGCTG CGCACTTTCG TGGCGGTGGT GGAAACGGGC AGCTTCACGA AGGCGTCGAC GACCGTGCAT CGTTCGCAGG CGGCGGTCAG TATGCAGATC AAGCGGCTCG AAACCATGCT CGGCACGACG CTGTTCGCCC GCAATACACG CAATCTGTCG CTCACGCGGC CGGGCAATAC GCTGCTCGAA TACGCGCGGC GTGTGCTGGC GTTGCATGAG GAGGCGTGGT CGGCGATTGT TCGGCCGGAG GTGACAGGAA GAGTAGTACT CGGTGCGCCG GACGACTACG TGTCGTCGCT GCTGTCGCCC GTTTTGCGGC GCTTTTCGAA TCTGTATCCG CACGTGGAAA TCGAAATCGT CTGCGCGCAA AGCACGTCGC TCGCGCCCAT GCTCGCTGAC AACAAGATCG ATCTTGCCTT CGTCACGCGC GACCGCAAGC TGCGCGGCGA ATTCGTGCGT AGCGAGCCGA TGGTGTGGGT GGGGGCGTCG GTGGATACGC CGGTGCTGGC GGCGTCGCCG CTGCCGGTGG GACTCTATGA GCCGGGCTGC GTGGCGCGCC AGCATACGCT GGCCGCGCTC GACGGCGCGC GGATCCGCTA TCGCGCCGCG TTCAGCAGCG CGAGCCTGAT GGGACTGGTG GCGACCGTGG ATGCGGGGTT GTCGGTGATT GCGCTCACGC GTTGCAGCGT GCCGCCACGG TTCGCGATTC TCGGTGAAGC ACAGGGTTTG CCGAAGATCG CGCCGCTGGA AATCGTGGTG GCGCGCAGCG CCAAATCGGA TCGTCCGACT TGCGATTATC TGGCCGCGCA GATGATGCAG GATCTGTCGC AGCGGCCTCA GGCGCGTGGG GCTTCGGCTT AG
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Protein sequence | MHPEFDVDLL RTFVAVVETG SFTKASTTVH RSQAAVSMQI KRLETMLGTT LFARNTRNLS LTRPGNTLLE YARRVLALHE EAWSAIVRPE VTGRVVLGAP DDYVSSLLSP VLRRFSNLYP HVEIEIVCAQ STSLAPMLAD NKIDLAFVTR DRKLRGEFVR SEPMVWVGAS VDTPVLAASP LPVGLYEPGC VARQHTLAAL DGARIRYRAA FSSASLMGLV ATVDAGLSVI ALTRCSVPPR FAILGEAQGL PKIAPLEIVV ARSAKSDRPT CDYLAAQMMQ DLSQRPQARG ASA
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