| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4821 |
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| Symbol | |
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| ID | 6279661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 934323 |
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| End bp | 936005 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642615908 |
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| Product | malonate decarboxylase, alpha subunit |
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| Protein accession | YP_001888556 |
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| Protein GI | 187919525 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
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| TIGRFAM ID | [TIGR01110] malonate decarboxylase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0894844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0340709 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGAC CCGCCGAAGC CGCTGCGTCC GCAGTATCGA CACCCACCGC CGCCCGTTCG
TGGACCACCC GCCGCGACGA AAAGAACCGC CGCCTCGCCG CCATTTCGCC CTGGCTCAAA
GACGGCGTGC TGCCGCCGGA GCGCATCGTC GACGCGCTCG AAACGCTGAT TCAGCCGGGC
GATCGCGTCG CTCTCGAAGG CGACAACCAG AAGCAGGCCG ACTTCCTCTC CCGCTCGTTC
GCCAAGGTCG ATCCGCAGAA GATTCACGAC GTGCATCTGC TGATTTCGAG CATCGGCCGC
CCCGAGCATC TGACGCTGTT CGAGCGCGGC ATCGCGCATA AGGTCGACTT CTCGTTTGCC
GGTCCGCAAA GCCTGCGCGT CGCGCAACTG CTCGAAGACG GCCAGCTGGA AATCGGCGCG
ATCTATACGT ACGTCGAGTT GTACGCGCGC ATGTTCGTGG ATCTGACGCC GCACGTCGCG
CTGCTGTGCG CGGAAAAGGC CGACCGTCAT GGCAATCTGT ACACCGGCGC GAATACCGAA
GACACGCCCA CCATCGCCGA GGCGGCGGCC TTCCGGCATG GCATCGTGAT CGTGCAGGTC
AACGAGATCG TCGACGAACT GCCGCGCGTC GACATTCCGG GTTCATGGGT CGACGTGGTC
GTGCAAGCGG ACCGGCCGTT CGCCGTCGAA CCGCTGTTCA CGCGCGATCC GCGCCATATC
GGCGATCTGC AGGTGCTGAC CGCGATGATG GTGATTCGCG GCATCTACGA GCCCTACGGC
GTAACGTCAC TGAATCACGG CATTGGCTTC GACACGGCCG CGATCGAATT GCTGCTGCCC
ACGTACGGCG AATCGCTCGG CCTGAAGGGC AAGATCTGCC GCAACTGGAC GCTCAATCCG
CATCCCACCA TGATTCCCGC GATCGAGTCG GGCTGGGTGG ACAGCATCCA TTGTTTCGGC
AGCGAAGTCG GCATGGAGCG GTATATCGAA GCGCGTCCCG ACGTGTTCTT TACCGGCAAC
GACGGCAGCC TGCGCTCGAA CCGCGTGCTG TGCCAGCTGG CCGGGCAATA CGGCGTCGAT
CTGTTCATCG GCTCGACTTT GCAGATCGAT GCCGACGCGA ATTCGTCGAC GGTCACGCGC
GGGCGTCTCG CCGGCTTCGG CGGTGCGCCG AACATGGGCC ACGATCCGCG CGGCCGGCGC
CATTCGAGCG AAGCGTGGCT CAAGCTGCTG CGCGATGAGG GTCCGGTATC GCGTGGCCAC
AAGCTGGTCG TGCAGATGGC CGAGACCTAC AAGAAAGGCG GCGAGCCGAC CTTCGTCGAT
GAGCTCGACG CCGTCGCGGT CGGCGCGAAA AGCGGCATGC CGATTGCACC CGTGATGATC
TACGGCGACG ACGTCAGCCA TGTGGTCACC GAGGAAGGCA TCGCGCATCT GCACAAGGCC
GAAGGCATCG ACGAGCGGCG CGCGGCGATT GCCGCCGTGG CCGGCGTGAC GCCGATCGGA
CTACGCGCGA AGCCAGAGAA GACGGCGGAA TTGCGCCGAC GCGGCATCGT CGCGTATCCC
GAGGATCTCG GCATCCGGCG TGGCGAGGCC AAGCGCTCGC TGCTGGCGGC GCGCAGCATC
GACGATCTGG TGACCTGGTC GGGCGGCCTG TACGAACCGC CGGCGCGCTT CAGGAGCTGG
TGA
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| Protein sequence | MNRPAEAAAS AVSTPTAARS WTTRRDEKNR RLAAISPWLK DGVLPPERIV DALETLIQPG
DRVALEGDNQ KQADFLSRSF AKVDPQKIHD VHLLISSIGR PEHLTLFERG IAHKVDFSFA
GPQSLRVAQL LEDGQLEIGA IYTYVELYAR MFVDLTPHVA LLCAEKADRH GNLYTGANTE
DTPTIAEAAA FRHGIVIVQV NEIVDELPRV DIPGSWVDVV VQADRPFAVE PLFTRDPRHI
GDLQVLTAMM VIRGIYEPYG VTSLNHGIGF DTAAIELLLP TYGESLGLKG KICRNWTLNP
HPTMIPAIES GWVDSIHCFG SEVGMERYIE ARPDVFFTGN DGSLRSNRVL CQLAGQYGVD
LFIGSTLQID ADANSSTVTR GRLAGFGGAP NMGHDPRGRR HSSEAWLKLL RDEGPVSRGH
KLVVQMAETY KKGGEPTFVD ELDAVAVGAK SGMPIAPVMI YGDDVSHVVT EEGIAHLHKA
EGIDERRAAI AAVAGVTPIG LRAKPEKTAE LRRRGIVAYP EDLGIRRGEA KRSLLAARSI
DDLVTWSGGL YEPPARFRSW
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