Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4794 |
Symbol | |
ID | 6279422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 900484 |
End bp | 901773 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642615876 |
Product | phosphonoacetate hydrolase |
Protein accession | YP_001888529 |
Protein GI | 187919498 |
COG category | [R] General function prediction only |
COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
TIGRFAM ID | [TIGR02335] phosphonoacetate hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000130224 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00000128506 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAAATA CGAGCATAAG CACGAGCACA AGCGAACGCA CGATCGAAGT CAACGGCCGC AGCTACCGGC TGCCCTCGCA ACCGACGGTG GTGGTGTGCG TCGACGGCTG CGAATTCGAT TATCTCGAAG CCGCGGTCGC GGCGGGCGTC GCGCCGTTCA TCGGCAAGAT GCTCAAGGGC GGCGCCGCCT TCAAGGGCGA CTGCGTGATC CCGTCGTTCA CCAACCCGAA CAATCTGTCG ATCGTGTGCG GCGTGCCGCC TTCGGTGCAC GGCATATGCG GCAACTACTT CTGGGACCCG GACGCGAACG GCGGCGAGGG CGCGGAAGTG ATGATGAACG ATCCCGCTTA CCTGCGCGCC GGCACGCTGT TGGCCGCTGC TGCCGAAGCC GGCGCCGCGG TCGCCGTGGT CACCGCGAAA GACAAATTGC GCCGGCTGCT CGGCTGGCAG TTGAAAGGCA TCTGCTTCTC GGCGGAAAAA GCCGACAAGG TGACGTTCGA GGAAAACGGC ATCGGCGAAG TGCTCGATCT GGTCGGCATG CCGGTGCCCG ATGTGTATAG CGCCGGGCTG TCCGAATTCG TGTTCGCGGC CGGCGTGCGG CTTGCGCAAA CGCGCAAGCT CGACCTCATG TATCTGTCCA CCACCGATTA CATCCAGCAC AAATGGGCGC CGGGTACCGA AGGCGCGAAC GCCTTCTACG CGATGATGGA CGGCTACCTC GCGAAGCTCG ACGCGCTCGG CTGGGTGATC GGCCTGACCG CCGATCACGG TATGAACGCC AAGCACGATC CGCAGACGGG CGAGCCGAAC GTGATCTATT TGCAGGACGT GCTCGACGAC TGGCTCGGCC ATGGCCGCGC GCGTGTCATT CTGCCGATCA CGGATCCGTA TGTGGTGCAT CACGGCGCGC TCGGCTCGTT CGCGACGATT TATCTGCCGC GCGATGTGAG CGTCGCGCAG GTGATCGAGC GGATCGGCGG CTTGCAGGGG ATCGATACCG TGCTCGACAA CGCGGCGGCC TGCGAGCGCT TCGAACTGCC GAACGATCGC GTCGGCGATA TCGTCGTGGT CAGCACCAAG CATGTGGTGC TCGGCACGCG GCGCGCGGAA CATGATCTGT CCGGGCTGAC GGTGCCGTTG CGCTCGCATG GCGGGATTTC CGAGCAGGAA GTGCCGCTGC TGTTCAACCG GCGTGTCGAA GCGTTGCCGT CCAGCGGTGG CGAAAGCGGC AAGAGACTGC GCAACTTCGA TATCTTCGAC ATCGCCTTGA ATCGCGTGTC GTCATCATGA
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Protein sequence | MANTSISTST SERTIEVNGR SYRLPSQPTV VVCVDGCEFD YLEAAVAAGV APFIGKMLKG GAAFKGDCVI PSFTNPNNLS IVCGVPPSVH GICGNYFWDP DANGGEGAEV MMNDPAYLRA GTLLAAAAEA GAAVAVVTAK DKLRRLLGWQ LKGICFSAEK ADKVTFEENG IGEVLDLVGM PVPDVYSAGL SEFVFAAGVR LAQTRKLDLM YLSTTDYIQH KWAPGTEGAN AFYAMMDGYL AKLDALGWVI GLTADHGMNA KHDPQTGEPN VIYLQDVLDD WLGHGRARVI LPITDPYVVH HGALGSFATI YLPRDVSVAQ VIERIGGLQG IDTVLDNAAA CERFELPNDR VGDIVVVSTK HVVLGTRRAE HDLSGLTVPL RSHGGISEQE VPLLFNRRVE ALPSSGGESG KRLRNFDIFD IALNRVSSS
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