Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4748 |
Symbol | |
ID | 6277745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 855696 |
End bp | 856925 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642615830 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_001888483 |
Protein GI | 187919452 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.376199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.100184 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG CGCCGGCAAT CCAGGTCAAG CGTCCGCGGC GCGGCCGCAT CGTGCTCGCA ATCGTGGTGC TGGCGCTGAT CGCGCTGGTG GCGTTTCATG TGCTGCGCTC GAAGCCAGCC AAGCCCACCG TGGCGCCGCA GGTCGTGACG GTCGCCGCCG CCACCACGGG ACCGATGCCG GAAATTTTGA GCGAGCTAGG CACGGTGACG CCCGTCGCCA CCGTCACCGT GCTGCCGCAA CTGAGCGGCT ACCTGACCGC CGTCGGCTAT CGCGAAGGCC AGGACGTGCA GAAAGGCCAG TTCCTCGCGC AGATCGACCC GCGCCAGTAC GAAATCAGCA AGCGGCAAGC GGAGGCGCAA CTCGCCAAGG ACAAGGCGGC GCTTGCCCAG GCGCGTGCCG ATCTCGCGCG CTATACGCAA CTGAACGAAC ATAAGTCGAT CGCCGAGCAG ACCTATGCGG ACCAGAAGTT TCTCGTCCAG CAGGACGAGG CGGCCATCAA GGCCGACGAA GCCAACATCG CCCAATTCGA TCTCGACCTG ATCTACTGCC ACATCACCGC GCCGGTATCG GGCCGGGTCG GGTTGCGTCT CGTCGACCCG GGCAACTACG TGACCGCATC GAGTCAACCC GGCATCGCGG TCATCACGAC AATGAAGCCG ACCACCGTCC AGTTCACGGT TCCGCAAACC GCGCTCGATA AGGTGCTGCA GCGCGTCAAC GCCGGTGCGC AGTTGCCGGT CACGGTGTTC AGCAGCGACA ACTCCCGGCA GATCGCGACC GGCACGCTGT ACGCGATCAA CAACCAGATG GCGACCGCGA CCGGCACCGT CACATTGCGC GCAACCGTCC CCAACGACGA CGAGGCGCTC TTTCCCAACG AGTTCGTCAA CGTCAAACTG CTGGTCGATA CGCTGCAAAA CGCGGTGCTG GTGCCGACGC CGGCGGTGCA GAGCGGCGCG CCGGGTGACT ACGTGTATCT GGTCAACGCC GACAATACGG TGTCGGTGCG CAAGGTCACG CTGGGACCGG GCGACGGCCG GCATACGGTG ATCACGGCGG GGCTCGCCGC GGGCAACGTG GTCGTCACCG ACGGCATGGA CCGTTTGAGC GACGGCGTGA AGATCAAGCC GTCGGCGGCG CGGCCGGCTG CGGGTGCTTC GGGTGCTTCG GGTGCTTCGG GTGCTACGCC GCCCGGGTCC GCGGCTAACG CAGCATCCGC AGCCTCATAG
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Protein sequence | MSDAPAIQVK RPRRGRIVLA IVVLALIALV AFHVLRSKPA KPTVAPQVVT VAAATTGPMP EILSELGTVT PVATVTVLPQ LSGYLTAVGY REGQDVQKGQ FLAQIDPRQY EISKRQAEAQ LAKDKAALAQ ARADLARYTQ LNEHKSIAEQ TYADQKFLVQ QDEAAIKADE ANIAQFDLDL IYCHITAPVS GRVGLRLVDP GNYVTASSQP GIAVITTMKP TTVQFTVPQT ALDKVLQRVN AGAQLPVTVF SSDNSRQIAT GTLYAINNQM ATATGTVTLR ATVPNDDEAL FPNEFVNVKL LVDTLQNAVL VPTPAVQSGA PGDYVYLVNA DNTVSVRKVT LGPGDGRHTV ITAGLAAGNV VVTDGMDRLS DGVKIKPSAA RPAAGASGAS GASGATPPGS AANAASAAS
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